Gene Namu_4374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4374 
Symbol 
ID8450000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4857758 
End bp4858894 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content69% 
IMG OID645043421 
Productaliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein 
Protein accessionYP_003203650 
Protein GI258654494 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTGCCA GTCGTCTTCG TTTCGCCCGC GTCAAACCCG TCGCCCTGCT CGGTGGGGCC 
GTGGCCGCCC TGCTGCTGGT CACCGCCTGC GGCTCCTCCT CCACCGCCTC TGAAACCACT
GCCCAGGCCG CCGCTTCCGG CTCGGCCGCT GGCTCCGCGG CGCCGGCCGG CACCGCCGCC
GACACCCTGC GCCTGGGGTA CTTCCCGAAC GTCACGCACG CCGCCGCCGT GCTCGGCGTC
GCCAACGGCA CCTTCCAGTC CGCGCTGGGC GACACCAAGC TCGAGACCAG TACTTTCAAT
GCCGGCCCGG CCGCGATCGA GGCCCTGCTC TCCGGCGCCA TCGACGCCAC CTTCATCGGC
CCCAACCCGG CCATCAACTC CTTCGTCAAG TCCAACGGTG ACTCCATCCG GATCGTCGCC
GGCGCGACCG ACAACGGTGC CGCCCTCGTC GTCTCGCCCG ACATCAACTC GGCCGCCGAC
CTCAAGGGCA AGACGGTGGC CACCCCGCAG CTGGGTGGCA CCCAGGACGT CGCCCTGCGC
AAGTGGTTGC TGGACAACGG CCTGAAGGTG CAGACGACCG GTGGCGACGA CGTCGACATC
GTCAACCAGG AGAACTCGCA GACCCTCGAT CTGTTCAAGA GCGGGGAGAT CGCCGGCGCC
TGGCTGCCCG AGCCGTGGGC GTCCCGCCTG GCCCTCGAGG CCAACGGCAA GGTGCTGGTC
GACGAGAAGA CCCTGTGGCC GGACGAGAAG TTCCAGACCA CCATCCTGAT CTCCTCCCGG
CAGTTCCTGG AGGATCACCC GGACACGATC AAGGCGCTGA TCGGTGGCGA AATCACCGAG
ATCAAGGCGA TCGAAGCCGA TCCCGCCGGA TCGCAGACCG CCCTGAACAA GGCGCTGGGT
GAGCTGACCG GAAAGCCCCT GCAGGACGCC ACCATCACCG CGGCGTTCGC CAACATCGAA
CCGACCTGGG ATCCGCTGGC CGGGACGCTG AACACGATCG CCGAGAACGG CGTCGCCGCC
GGCACCCTGT CCGAGGTGCC CGATCTCAAG GGCATCTACG ACCTGCGGCA GCTCAATGCC
GTCCTCGCCG AGCAGGGCGA GAAGCCGGTC AGCGCGGCCG GTCTCGGCCA GGAGTAG
 
Protein sequence
MSASRLRFAR VKPVALLGGA VAALLLVTAC GSSSTASETT AQAAASGSAA GSAAPAGTAA 
DTLRLGYFPN VTHAAAVLGV ANGTFQSALG DTKLETSTFN AGPAAIEALL SGAIDATFIG
PNPAINSFVK SNGDSIRIVA GATDNGAALV VSPDINSAAD LKGKTVATPQ LGGTQDVALR
KWLLDNGLKV QTTGGDDVDI VNQENSQTLD LFKSGEIAGA WLPEPWASRL ALEANGKVLV
DEKTLWPDEK FQTTILISSR QFLEDHPDTI KALIGGEITE IKAIEADPAG SQTALNKALG
ELTGKPLQDA TITAAFANIE PTWDPLAGTL NTIAENGVAA GTLSEVPDLK GIYDLRQLNA
VLAEQGEKPV SAAGLGQE