| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4228 |
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| Symbol | |
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| ID | 8449854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 4681552 |
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| End bp | 4688739 |
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| Gene Length | 7188 bp |
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| Protein Length | 2395 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 645043277 |
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| Product | conserved repeat domain protein |
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| Protein accession | YP_003203506 |
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| Protein GI | 258654350 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.687969 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCACTG TCGCTCGACG CAGGACGCGC CGGTGGGGGG CGCTGGCCAC GGTGGTCGCC
CTGGTCGCGG GCCTGCTCAT GGTCTCCGCG ACGATCGCCC CGGCCCCGCC CGCCCACGCC
GCGACGGTGG CCATCGGCAC GATCGCCACC CAGATGGCCA ACCAGCAGGG CGTCGACGCC
GGCACCAGCG GTAACTGCAT CCGGTATGCC CCGTCCAGCG GCACCGGGTC CTCGTCCACC
TCCTCGGCCT GGGTCACCAA CACGGTGGCC GGCCTGCCCA ACTCGGCGAC CACGGCGCAC
GGCTACAGCA CCAGCTGCCC GACCAACCTG AGCACCAGCA GCCAGAGCGC GCTGGGCTTC
CGGCCCTCCA CCGTCACCTC GGCCGAGGAC GGGATGCCCT TTCTGATCGG CGGCATGACC
CACTACAACA ACCCGATCCA GGCGAACGAT CAGTACTTCA CCGGCGAGCT GCGGACCCAG
CTGGGCGGTT TCAGCGGGAC GACGGTGACG TTCAACTGGA CGATGAACGA GACCCCCAAC
ACCGGATCCG GCAACTGCTG CAACGACATC ACCTCGTTCA CCAACCAGAT CTCCGACGTC
ACCCTGACCC AGGGCGGGCT CACCTACCGG CTGGTGATCC TGGGCTTCGT GCCGGCCGCC
AGCGCGACGA GCTGCCCGGC CACGCCGGCC GGCAATCCGG TCAACGAGTT CTCCACCGTC
GAGGGCGCCC AGACCAACGC CTGCCTGTAC GCCTCGCTCC AGCAGGTCCG CACGCTGCGG
ATCGTCAAGA ACGTGGTCGG CTCGCCGCCG GGCACTCCTT CGTTCAGCTA CAACAGCACG
TCGACGCTGA CCGGTTCGGC CTGGGCCAAC ACCACGTTCT CGCTGGCCTC CCGGGGCACC
GTCGAGCGAC CCTTGACCTC CGGCAGCACC GTCACCGTGA CCGAGGGCGA CCCGGCCGAC
GACCGCTGGT CGTTGACCGG CCTGACCTGC CAGCAGTACA ACGCGCTCGG CGTGCTGGTC
GACCTGCCCG GAACCGGCAA CCTGGCCGCG CGGCGGATCA GCCTGGACCC GGTCCCGGCC
CCGCTGTATC CCGCGAATCC GGTCGTCATC TGCACCTTCA CCAACACCTA TACCCCGCGG
ACGACGCTGA CCCTGGTCAA GTCCGTGACC GGGGCCGTGG TCAGCCCGTC CCTGTTCACG
CTGACCGCGA CCGGGACGGC GTCGCCGACC AGCGGCACCG TGGTCTCCGG CGCCTCCGGC
TCGACGGCCG TCACCAACCA GCGCATCGTC GCCGGCACCT ACCAGCTCAC CGAGCTCGGC
ACCGGGGCGG CCGCAACCGG CTTCGTCCAG GTCGGCTCGT GGACCTGCGC CCGCGGGTCC
ACCACCTATC CGGTCAGCCC CACCGGGGTG GTCACCCTGC CGGATCTGCC CGCCGGCAGT
GCGGTCGGCT GCACCGTGGT GAACCGGGCG GCCACCGGCA CGCTGCGCAT CAGCAAGGTC
GTCGACGACC CGCAAGGCGG GTACGTCGGA GGCACCGGCC AGAGTTTTGC CGGCGCCTAC
ACCTGCGGCG CCGGGTTCAG CGGCAGCTTC AGCGCCCTGA CCACCGCGGC GGCGGTGACC
GTGACCGGCA TCCCGGCCGG CCGGGCCTGC ACGGTCAGCG AGAACGGCCC GACCGGCGGC
CTGCTCAACG CCTCGTTCGC CTGGGGGACC CCGTCGTACT CGGCCCAGCC GGTGACCATC
ACCGACCAGG CCACCGCCGA CGTCACGATC ACCAACCCGG TGGTGCAGCG GCTGGGCAGC
TTCGCCGTGA CCAAATCCAT CGACGGGCCC GGCGGGTACA CCGGGGGCGT CAACCGGGTC
TTCCCGGTCG CGTACTCCTG CACGCTGACC AACGGCCCGA CGTCGGCGGG CACGCTGGAC
CTGACCGCGG CACAGGCCGT CTCCCCGGCG GCGGCGATCC CGGCCGGCTC GGTCTGCACC
TTCAGCGAGA CCCTGACCGC GCAGGCCGGG GATTTCGGTG ACCCCAGCTA CGCCTGGTCG
GGCTACACGG TGACGCCGAC CAGCGTGACG ATCGGCGACG GCGCCACCGC CCAGGTCGGC
ATCACCAACA CCTACGAGCG CGACGCCGGC AGCCTCGTGC TGGCCAAGCA GATCCAGGGC
GACGGCTACA TCGGCACCGG CGAGCCGTTC ACCGTGCAGT ACACCTGCGG CGTGGCCTCC
GGCCAGGTGA CGTTGGCCGC GGGCGGGAGC GCGACGGTCT CCGTGCCGGC CCGCAACACC
TGCACAGCGG CCGAGGTGCC GCCCGCCGCC GACCTGCTGC AGCCGGCCTA CGTCTGGGGC
AACGCCACCT GGTCCGACGG CACCAGCGCG ACCAACAGCG TGACCGTGCC GGCCAACGGC
ACCGCCACCC TGACGGTGAC CAACCCGACG ATCCCGGTCT TCGGCCGGGT CCAGGTCGGC
AAGCAGATCA CCGGCGAGAC CGCGGGGGTC ACCGCCGCGG CCAGCTTCCA GATCACCGTC
TCCTGCAGCA ACGCCTACAC AGGCGCCTTC ACCGTGGGCG TCGGCGGAAC CGCGCTCACC
CCCGACCTGC CGGTGGGCAC GTCCTGCTCG TTCAGCGAGG CCACCCCGAC CGTCGGCCTG
CTCGACTCGT CCTACCAGTG GGGCACTCCC GTGCTGCCCG GACCGGTGAC CATCACCGCG
CCCAACCAGG TGCCCAGCGT CGTCGTCACC AACCCGGTCA GCCGGGTGTA CGGGGACCTG
GAGATCAGCA AGCAGCTGGT GGATCCGAGC GGCCGGGTCG ACCGGCAGCG GCAGTACACC
ATCGACTACG ACTGCAGCTA CGCGGGCGTG AGCGCGGCCA ACGGCACGGT CCAGCTCTTC
GCCGGCGAGT CGACGGTGAT CCCCGACATC CTGCTGGAGT CCCGGTGCAC GGTGGTCGAG
GACCCGACCA CCCTGGACGC GCCCCCCGTG GCCGACGACA CCTCCTGGGT GTGGCTGCCG
CCGACCTACG ACCCCGGAAC CTCGGTGCTG ATCACCTCGC CCGACTTCCC GGCCACCGTG
ACGGTGACCA ACCGGACCAA CCAGCTGACC GGCACCTTCC AGCTGACCAA GTCGGTGGTC
GGTGACGGCA AGGCCCTGGG CTACCAGCCG GGCAGCCAGT TCACCTTCGC GGTCGAGTGC
ACCGACGGCT ACGAATCGAC GGTCGACCTG GCCGACGGTC AGAGCTGGAC GCCGGACCGG
GCCATCGCGT CCGGAAGCTC CTGCACCATC ACCGAAACCG GCAAACCCGA CCCCCTCTCG
CCGGCCTTCG GCTGGGACGA CGTCGAGTTC GGCATCGGCA GCAGCCGGGT CAACGGATCG
ATCACCATCC GGATCCCCGA GACGGCCACG CCGATCCAGG TCAACGCGGT CAACCCGATC
ACGCCCCGGT TCGGCTCGCT GGAGCTGACC AAGCAGGTCA CCGGGCAGAC CGCCGGCCTG
GTGCCCGGTA CCACTTTCGA CGTCAACGTC AGCTGCGGCC CCGGTGACCT GTTCACCGTC
ACCCTCACCG AGGGTGAGCC GAGGACGCTG ACCGGCATCC CGGTCGGGGT CAGCTGCACC
GTGGCCGAGC TGCCGCCCGA CCCGGCCGGC CTTGTGGACG CCTCCTACGG CTGGGGCCCG
GCGACCTACG ATCCGGGCGC CACCGTGACC ATCGCGCAGG AGGGCCAGCA GGTCGAGGTC
GCGATCGTCA ACCCGATCGT CCGGGTCGGC GCGCCGGTCC GGGTGGTCAA GTCGTTGACC
GGCGGCCAGG GCGTCATCGA TCCGGCTCGG ACCTATCCGA TCACCTGGTC CTGCAGCTAC
GGCGGCCAGC AGGTCGCCGG CGGCACCCTG GACGCGGTGG TCGACCCGAC CGGCGTCGTC
GTCGACCAGG ACGTGCCGCT GACCGCGCAG TGCACGGCCA CCGAAGGCGA TCTGGGCGTC
CCGTCCGACG ATCCGGCCTA CCGCTGGCTG GCCCCGACCG TCACCGGCAC CACCGTGACG
GCGGACGGCC AGAACGCGGT CACCGTGGCC AACGCGCTGA CCCGCGACAC CGGCGAGGTC
GTGGTGCACA AGACGGTCAC CGGGGCGAGC GAGGGCTACC TCGGCACCGG CGCCGATTTC
ACCATGCACG GCCAGTGCGC GGTGCCCGGA ACGGACGTCC CGACCCGGTA CGCCGACGGC
ACGATCGCCA ATCTCGGCAC CGTGACGATC GCTCCGGTCT CGGTCGGCTG GACCTGCTCC
GGCTTCGAGG ACACCCCGGC GCAGGGCCTG CTCGCCGACA CCTCCTACGC CTGGGGATCA
CCCATCATCA CCGGGACGCC GGCGTTGACC CCGCCGGTCG GGGGCACCTT CACCCTGGCC
GAGGCCGGCG CCCGGCAGGA CTTCTTCGTC GAGAACCCGG TCGTCCGGGT GCGCAGCACG
TTCCAGATCA CCAAGAACGT GGTCGACCCG TTCGGCGCCC TGATCCCCGG CACGCAGTTC
AGCGGGACGT TCAGCTGCCG GTACGGCTCC GACGACCCCG TCACCGGAAA CTGGACCCTG
ACCAACGGGG ACACGTTCAC CGGCCCGGCG GTCTACCTGA ACTCGCAGTG CACGGTCACC
GAGAACGACC TGGGCACCGC CGGTCTGCCC GATGCCTCCT TCGACTGGGC GGCGCCGGTC
GTCGGTGATC CGGTCACCGT GGTTCCCGGC GGGACCGCGA CCATCACCGT CACCAACACG
ATCGAGCGGC AGTACGGCGG CCTGGAGGTC GGCAAGGTGC TCGACGACCC GGACGGCGGG
GTCCGGCCGG ACACCGACTT CACCGGCGTG TGGACCTGCA CCCTGGGTGC GCAGACCTGG
AGCGATCGGT GGGAGGTCGG CGCGGGCGCC GCGGCGACCC TGTTCACCCC GGCGGACGCC
CGGGTACCGG CCACGGCCGT CTGCGCGATC ATCGAGGACA CCCCGGATCC GGCGCGGCTG
CTGGACGGCT CCTACGCCTG GGGGGACCGG ACGTACACCC CGGAATCGGT CATCCTGGTC
GCCGACGAGA CCGCGCAGCT GTCCGTCACC AACACCGTTC AGCGGGTGTA TTCGGGCTTC
GACGTGGCCA AGGCCATCAC CGGATCGGTC GCCGACGACG ACCTGGTGCC GGTCGATCGG
GTGTTCACCG GCACCTTCTC CTGCCAGTAC GGCTCGGACG TGCCGGTGAC CGGTCCCTGG
ACGGCCAGCG TGGCCACAGC GTGGGTGCAG GCCGGCATCC TGGTCGGCTC GGTCTGCCAG
GTGACCGAGG AGGTGCCCCC GGGGGCCGGC GGGCAGCCGG TCACCGGCGA CTCCTCCTAC
ATCTGGGGCA CCCCGGATCT GGGGTCCTCG GTCACCGTGA CCCCGCCGAC CGAGGCGAAC
CAGACGGTCA CCGTCACCAA CCCCACGGAG CGGCTGTTCG GGCGCTTCAC CCTGACCAAG
GCGGTCACCG GAGCCACCGA CGGCATCACC GACCCGCAGC CGTTCCCGGT GACCTACTCC
TGCCAGCCCG GGGACGGCCC GGCGATCACC GGCAGCACCG CGCTGGCGGC CGGCCAGACG
CTGACCGTCG GACCTGACCC GGGTGACGAT CTGCAGCTGT TCATCCCGGT GTCCAGCATC
TGCACCCTGA CCGAGCCGCT GGCCACGATG CCGCCGCTGC GCGACAGCTC CTGGACCTGG
GGCGACCCCG GGTTCACCGT GGTCGGCGAC ATCCCCACGG CCGGGCCGGT CACCGTGCCC
TGCGCGGACC CGCTGCTCAC CCCGTGCCTG GGTGAGCGGT CGGTGACGGT CACCATCCCG
CGGCCGCAGG AGGACTACCC GGATCCGCCC AGCGTCGGCC TGGACATCAG CAACCCGGTG
CTGACCACCG ACGGTTCCTA CGCGGTCAGC AAGTCCAGCG ACCCGGCGTC GGGAACGGTG
GTGGCCCCGG GGTCGACCAT CACCTACTCG GTCACGGTGA CCTCGACCGG GGAGGTGCCG
GTGCACGACG TCGTCGTCAC CGACGACCTG TCGGCGGTGC TGCCGTACGC GGTGATCGGG
TCGATCTCCG ACCCGGCCGC GGTCCTGGAC TCGCAGACCC AACAACTGGT CTGGACGGTC
GGCGACGTGC CCGGCGGGCA GAGCCGGACG CTGACCTATC AGGCGACGGT CAACCCCGGG
GTCGCCGGGG TCAGCATCAC CAACCAGGTC ACCAGCACCG CCGACGTGCG TCCGAGCAGC
TGCGCCGAGC CGGGCGATCC GGTCTGCACG ACGACGCATC GCACGCCGGA CCGGCCCACG
ATCAGCAAGC AGGTGGACGG GGACCCGGTC TTCGATCCCG GCCCCGGGAC CTGGACCGTG
CCGTACGCGA TCGTGGTGAC CAACCCCAAC CCGGACACCG CGATCACCTA CTCGCTGACC
GACAACATCG CCTTCCCCAC CGACGCGACG ATCGTGTCCG CCGCGGTGAC CTCCGCGCCG
GACGGGGTCA GCCTGTTCGA ACCGGCCTGG ACCGGCGGTG ACCAGACGAC GATCGCCCAG
GACGTCGCGC TGCCCGGCGG CGCCAGCCAC ACCTACCGGG TCGCGGTGAC CGCGACCGTG
CCGCTCACGA TCGACCCGGC CCGCCTGGCC TGCGCGGCGA CCGGATCGGG TGGCGGGTCC
GGGTTCTTCA ACATCGCCAC GCTGTTCGCG CTGGACTCCT CGGCCATGGC AGACGCCTGC
GCCCCGGTCC CGGTGTTCCT GGTCGTCGAC AAGCAGTGGG TCATCGACGG CGTCACCTAC
CGCGACGGCA CGCAGCCGCT CGGGTACTCG GCGACGCTGA CCCTGGACGG CGTGGACCGG
GTCTGGCGCA CCGTGTACTG GGCCGACCAG CCGGGGTCGA CGGTGGACGT GGGGGAGCGG
GCCGTCGTAC CCGCGTCCTG CACCTCCGCC TCGTCCGGGA CCGGCCCGGT CACGCTGACC
GCGCCGCTGA CCTCGACCGT GGTCACCAAC GTGGTCACCT GTGTCGGGCC CACCCCCGGA
CCCACGCCGG GTCCGACGCC CGGGCCGGTC CCGCCGCATC CGACCCCGCT GCCGGTGACC
GGCTTCGCGG TCGGGTCTTT CCTGGGCTGG GGCCTGGGCT TGCTGCTGAT CGGGGCCGCG
ATGATCGCGC TGGCCGGCTG GCGACCGGGC CGGCGCCGGT CGGCCTGA
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| Protein sequence | MGTVARRRTR RWGALATVVA LVAGLLMVSA TIAPAPPAHA ATVAIGTIAT QMANQQGVDA
GTSGNCIRYA PSSGTGSSST SSAWVTNTVA GLPNSATTAH GYSTSCPTNL STSSQSALGF
RPSTVTSAED GMPFLIGGMT HYNNPIQAND QYFTGELRTQ LGGFSGTTVT FNWTMNETPN
TGSGNCCNDI TSFTNQISDV TLTQGGLTYR LVILGFVPAA SATSCPATPA GNPVNEFSTV
EGAQTNACLY ASLQQVRTLR IVKNVVGSPP GTPSFSYNST STLTGSAWAN TTFSLASRGT
VERPLTSGST VTVTEGDPAD DRWSLTGLTC QQYNALGVLV DLPGTGNLAA RRISLDPVPA
PLYPANPVVI CTFTNTYTPR TTLTLVKSVT GAVVSPSLFT LTATGTASPT SGTVVSGASG
STAVTNQRIV AGTYQLTELG TGAAATGFVQ VGSWTCARGS TTYPVSPTGV VTLPDLPAGS
AVGCTVVNRA ATGTLRISKV VDDPQGGYVG GTGQSFAGAY TCGAGFSGSF SALTTAAAVT
VTGIPAGRAC TVSENGPTGG LLNASFAWGT PSYSAQPVTI TDQATADVTI TNPVVQRLGS
FAVTKSIDGP GGYTGGVNRV FPVAYSCTLT NGPTSAGTLD LTAAQAVSPA AAIPAGSVCT
FSETLTAQAG DFGDPSYAWS GYTVTPTSVT IGDGATAQVG ITNTYERDAG SLVLAKQIQG
DGYIGTGEPF TVQYTCGVAS GQVTLAAGGS ATVSVPARNT CTAAEVPPAA DLLQPAYVWG
NATWSDGTSA TNSVTVPANG TATLTVTNPT IPVFGRVQVG KQITGETAGV TAAASFQITV
SCSNAYTGAF TVGVGGTALT PDLPVGTSCS FSEATPTVGL LDSSYQWGTP VLPGPVTITA
PNQVPSVVVT NPVSRVYGDL EISKQLVDPS GRVDRQRQYT IDYDCSYAGV SAANGTVQLF
AGESTVIPDI LLESRCTVVE DPTTLDAPPV ADDTSWVWLP PTYDPGTSVL ITSPDFPATV
TVTNRTNQLT GTFQLTKSVV GDGKALGYQP GSQFTFAVEC TDGYESTVDL ADGQSWTPDR
AIASGSSCTI TETGKPDPLS PAFGWDDVEF GIGSSRVNGS ITIRIPETAT PIQVNAVNPI
TPRFGSLELT KQVTGQTAGL VPGTTFDVNV SCGPGDLFTV TLTEGEPRTL TGIPVGVSCT
VAELPPDPAG LVDASYGWGP ATYDPGATVT IAQEGQQVEV AIVNPIVRVG APVRVVKSLT
GGQGVIDPAR TYPITWSCSY GGQQVAGGTL DAVVDPTGVV VDQDVPLTAQ CTATEGDLGV
PSDDPAYRWL APTVTGTTVT ADGQNAVTVA NALTRDTGEV VVHKTVTGAS EGYLGTGADF
TMHGQCAVPG TDVPTRYADG TIANLGTVTI APVSVGWTCS GFEDTPAQGL LADTSYAWGS
PIITGTPALT PPVGGTFTLA EAGARQDFFV ENPVVRVRST FQITKNVVDP FGALIPGTQF
SGTFSCRYGS DDPVTGNWTL TNGDTFTGPA VYLNSQCTVT ENDLGTAGLP DASFDWAAPV
VGDPVTVVPG GTATITVTNT IERQYGGLEV GKVLDDPDGG VRPDTDFTGV WTCTLGAQTW
SDRWEVGAGA AATLFTPADA RVPATAVCAI IEDTPDPARL LDGSYAWGDR TYTPESVILV
ADETAQLSVT NTVQRVYSGF DVAKAITGSV ADDDLVPVDR VFTGTFSCQY GSDVPVTGPW
TASVATAWVQ AGILVGSVCQ VTEEVPPGAG GQPVTGDSSY IWGTPDLGSS VTVTPPTEAN
QTVTVTNPTE RLFGRFTLTK AVTGATDGIT DPQPFPVTYS CQPGDGPAIT GSTALAAGQT
LTVGPDPGDD LQLFIPVSSI CTLTEPLATM PPLRDSSWTW GDPGFTVVGD IPTAGPVTVP
CADPLLTPCL GERSVTVTIP RPQEDYPDPP SVGLDISNPV LTTDGSYAVS KSSDPASGTV
VAPGSTITYS VTVTSTGEVP VHDVVVTDDL SAVLPYAVIG SISDPAAVLD SQTQQLVWTV
GDVPGGQSRT LTYQATVNPG VAGVSITNQV TSTADVRPSS CAEPGDPVCT TTHRTPDRPT
ISKQVDGDPV FDPGPGTWTV PYAIVVTNPN PDTAITYSLT DNIAFPTDAT IVSAAVTSAP
DGVSLFEPAW TGGDQTTIAQ DVALPGGASH TYRVAVTATV PLTIDPARLA CAATGSGGGS
GFFNIATLFA LDSSAMADAC APVPVFLVVD KQWVIDGVTY RDGTQPLGYS ATLTLDGVDR
VWRTVYWADQ PGSTVDVGER AVVPASCTSA SSGTGPVTLT APLTSTVVTN VVTCVGPTPG
PTPGPTPGPV PPHPTPLPVT GFAVGSFLGW GLGLLLIGAA MIALAGWRPG RRRSA
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