Gene Namu_4217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4217 
Symbol 
ID8449843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4662475 
End bp4662987 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content74% 
IMG OID645043266 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_003203495 
Protein GI258654339 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.101631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.261158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAC CGGTGGTCGG CCTGATCATG GGCTCGGATT CGGACTGGAA GGTGATGGCC 
GCGGCCGGCG AGCTGCTGGA CGAGTTCGAC GTCCCGTACG AGGTCGGCGT GTACTCGGCG
CACCGGACCC CGCAGCGCAT GCTGGACTAC GCCGGCGCAG CCGCCGGGCG CGGTCTGCGG
GTGATCATCG CCGGCGCCGG CGGGGCCGCC CACCTGCCCG GCATGGTGGC CTCGGCGACC
GTGCTCCCGG TGGTCGGGGT GCCGGTTCCG CTGGCCACCC TGGACGGGCT GGACTCGCTG
CTCTCGATCG TGCAGATGCC GGCCGGCATC CCGGTGGCCA CGGTCTCGAT CGGCGGCGCC
CGCAACGCCG GGCTGCTGGC GGTGCGGATC CTGGCCAGCG GGGCCGACCC GCGGGCCGAC
CGGTTGCGGA CGTCCCTGGC CGGCTTTGCG GCCGGGCTGG AACAGATGGT GCTGACCAAG
CACGACGGCC TGCGCGAGCG CACCGGCCAC TGA
 
Protein sequence
MSAPVVGLIM GSDSDWKVMA AAGELLDEFD VPYEVGVYSA HRTPQRMLDY AGAAAGRGLR 
VIIAGAGGAA HLPGMVASAT VLPVVGVPVP LATLDGLDSL LSIVQMPAGI PVATVSIGGA
RNAGLLAVRI LASGADPRAD RLRTSLAGFA AGLEQMVLTK HDGLRERTGH