Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_4214 |
Symbol | |
ID | 8449840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 4659230 |
End bp | 4660390 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645043263 |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_003203492 |
Protein GI | 258654336 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.234142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.067843 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACGG CAATCAGCAC CGACCTGTTC ACCTTGACCG AGGACCACCG GGCCGTCCGG GAGGCGATCC GCGATCTGGC CGAACACGAG ATCGCTCCGC ACGCGGCCGA CGTCGACGAG CGGGAGCGGT ACCCGATCGA GGCGCAGAAG GCGCTGACCG CGGCCGGATT CCAGGCCGTG CACATCCCCG AGGAGTACGA GGGCGCCGGG GCCGACGCGG TGGCCACCGT CATCGTGATC GAGGAGGTGG CCCGGGTCTG CGGCTCGTCG TCGCTGATCC CGGCGGTCAA CAAGCTCGGG TCGATGCCGC TGCTGCTGTC CGCATCCGAG GAACTCAAGC AGCAGGTGCT GCCGAGCATC GCCAGCGGCG AGGCGATGAT CTCCTATGCG CTGTCCGAAC GGGAGGCCGG TTCGGATGCC GCCGCCATGC GCACCCGGGC GGTCCGCGAC GGCGACGACT GGGTGCTCAA CGGCACGAAG TGCTGGATCA CCAATGCCGG TGTGTCGAGC TGGTACACGG TGATGGCGGT GACCGATCCC GACAAGCGGG CCAAGGGGAT CAGCGCGTTC GTCGTGCATG CGGACGACCC GGGATTCGTC GTCGGCAGCA AGGAGCGCAA GCTCGGCATC AAGGGCTCGC CCACCCGGGA GATCCATTTC GAGAACTGCC GGATCCCGGG TGACCGGATC GTCGGCGAGC CGGGCACCGG ATTCGCCACC GCGATGGCCA CTCTCGATCA CACCCGGCCC ACCATCGGTG CCCAGGCGAT CGGCCTGGCC CAGGGCGCCC TGGACGTGGC CATCGGCTAC ATCAAGGAGC GTCGGCAGTT CGGCAGGCAC CTGGCCGAGT TCCAGGGACT GCAGTTCATG GTCGCCGACA TGGCGATGCA GATCGACGCC GCCCGCACGT TGGTCTACCA GGCGGCGGCG GCCGCCGAGC GGGGCGATGC GAACAAGACC TACCTGTCGG CCGCGGCCAA GTGCCTGGCC TCGGATGTGG CCATGAAGGT CACCGTCGAC GCGGTGCAAC TGCTGGGCGG GGCCGGCTAC ACCCGGGACT TCCCGGTGGA GCGGATGATG CGCGACGCCA AGATCACCCA GATCTACGAG GGGACCAACC AGGTCCAGCG GTTGGTCATG GCCCGCGCCC TGTTGAAGTA G
|
Protein sequence | MSTAISTDLF TLTEDHRAVR EAIRDLAEHE IAPHAADVDE RERYPIEAQK ALTAAGFQAV HIPEEYEGAG ADAVATVIVI EEVARVCGSS SLIPAVNKLG SMPLLLSASE ELKQQVLPSI ASGEAMISYA LSEREAGSDA AAMRTRAVRD GDDWVLNGTK CWITNAGVSS WYTVMAVTDP DKRAKGISAF VVHADDPGFV VGSKERKLGI KGSPTREIHF ENCRIPGDRI VGEPGTGFAT AMATLDHTRP TIGAQAIGLA QGALDVAIGY IKERRQFGRH LAEFQGLQFM VADMAMQIDA ARTLVYQAAA AAERGDANKT YLSAAAKCLA SDVAMKVTVD AVQLLGGAGY TRDFPVERMM RDAKITQIYE GTNQVQRLVM ARALLK
|
| |