Gene Namu_4178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4178 
Symbol 
ID8449804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4613160 
End bp4614236 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content65% 
IMG OID645043227 
Producthypothetical protein 
Protein accessionYP_003203456 
Protein GI258654300 
COG category 
COG ID 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0714985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGAGC ACCATGAATC GATGTCAAGG CGCAGCCTTT TGCGGACGGG TGCGGCAGTC 
GCGGCGATCG GTTTGTACGG CGCGCTGGGC GCGGGGACCG CAGGGGCCGC GCCTGTCGCC
GGCGGTGCCG GAGCGTGCGG TGCGCCCGCG GATGATCCGC ACTTCGCGTC GCGAGTCGGG
GCCGTCCAGC GCATGTCTGT AGCCGCCGCG GTCGAGACGT CCTACAACGG TTGGTCGGTG
GGCACCCCGG CATCAGCGAT CGGTGTGGCC AACTATGTCG TGCCGGGTAC GTCGATCTCG
ATTCCGGTTC GGTCCGACGT CGCGACGGTC CTGATCCACC TTGCCGACCG TTTCAATCGG
GAAGTCGAGG GGTTGCGGTC CGGCCAAGTG TGGGGCTACG ACTACCGACG GAATGTCAAC
AATCCCAGCG TGTGGTCCAA TCACGCTTCG GGTACGGCGA TCGACCTCAA TTCGGCTCTT
CACCCTAATG GGGCAAAGGG ATCATTTACA TCGAGTCAGG TTTCGGCCAT CCGGAACATT
CTGAGCTTCT TCGGGGATGT CATCTACTGG GGTGGCGACT ATCGCGGCAC GACCGACGAG
ATGCACTTCG AGATCGATGT CGCCCCGGGT GACAGCCGGC TCAAGTCGGT CGTGGCCGCC
ATCGGAGACC GGACGCTCAG CGGCACCCGC GTCACGCTCA GATCGCTTGC CAACAACAAG
TTCGTCTGCG CCGACAACGG GGGCGCCAGC GAGCTGATCG CGAACCGCGG CGTGGCGCAG
GCGTGGGAGC AGTTCATGAT GATCAACCGG GGCGGCTCAG CGGTCGCGCT CCGGTCCATG
GCGAACAATA TGTACGTGTG TGCCGACAAC GGCGGTGCCT CCCCGTTGAT CGCCAACCGG
TCGTCCGTGC TCGGCTGGGA GACCTTCGAT CTGATCCGCA ATTCGAACGG CACCGTCAGC
CTGCGGTCGT GGGCGAACGG GAAGTTCGTC TGCGCCGAGT ACGGCGGAGC ACTCTCGCTG
CGGGCGAATC GCGACGTGGC CCAGACCTGG GAGCAGTTCC AGATGCAGAC GGTCTAG
 
Protein sequence
MCEHHESMSR RSLLRTGAAV AAIGLYGALG AGTAGAAPVA GGAGACGAPA DDPHFASRVG 
AVQRMSVAAA VETSYNGWSV GTPASAIGVA NYVVPGTSIS IPVRSDVATV LIHLADRFNR
EVEGLRSGQV WGYDYRRNVN NPSVWSNHAS GTAIDLNSAL HPNGAKGSFT SSQVSAIRNI
LSFFGDVIYW GGDYRGTTDE MHFEIDVAPG DSRLKSVVAA IGDRTLSGTR VTLRSLANNK
FVCADNGGAS ELIANRGVAQ AWEQFMMINR GGSAVALRSM ANNMYVCADN GGASPLIANR
SSVLGWETFD LIRNSNGTVS LRSWANGKFV CAEYGGALSL RANRDVAQTW EQFQMQTV