| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4160 |
|---|
| Symbol | |
|---|
| ID | 8449786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 4596768 |
|---|
| End bp | 4598066 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 645043209 |
|---|
| Product | phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase |
|---|
| Protein accession | YP_003203438 |
|---|
| Protein GI | 258654282 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase |
|---|
| TIGRFAM ID | [TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.109598 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.292924 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGGAC CGGATCCGCT GGTCCACGAA TCGGTGACCT CGACGCAGCC GGCCGGTGCT
GACCGGCGTC CCCGGGTGGT GGTCGGGGTC GGTGGTGGGA TCGCCGCCTA CAAGGTCGGC
GGCCTGGTCC GGCTGTTCAC CGAGCACGGC GCCGACGTCA CCGTCGTGCC GACCGCCGCC
GCTCTGCGCT TCGTCGGTGC GGCCACCTGG GAGGCCCTGT CCGGGCACCC GGTCTCCACC
GACGTCTTCA CCGACATCCC GCACGTCAAG CACGTCGCCG CCGGGCAACA GGCCGATCTG
GTCGTGATCG CCCCGGCCAC CGCCGACCTG CTGGCCCGCG CGGCCACCGG CCGGGCCGAC
GACCTGCTCA CCTCGACCCT GCTGGTCACC CGGGCGCCGG TGCTGATGGC GCCGGCCATG
CACACCGAGA TGTGGACCCA CCCGGCCACC CAGGCCAACG TCGCCACCCT GCGCGCGCGC
GGCGTCGTCG TGCTGGATCC GGCCGTCGGC CGGCTGACCG GGGCCGACAC CGGCCCGGGC
CGGCTGCCCG AGGTCGAGCA CATCCACGCC GCCGCCGCGT TGCTGCTGGC CCGGCCGGCC
GCGCTGCCGC CGGACCTGGC CGGCCGGCGC GTGGTCATCT CCGCCGGTGG CACCCGGGAG
CCGCTGGATC CGGTGCGGTT CCTGGGCAAC CGGTCGTCCG GGCGGCAGGG CTACGCCCTG
GCCCTGGTCG CCGCCGCCCG CGGGGCCGCC GTCACCCTGG TCTCGGCCAA CGTCTCGCTG
GCGCCGCCAC CCGGCGTGCG GGTGGTCGAG GTGACCGATG CCCGGGCCCT GCAGGCGGCC
ATGGTCGAGC ATGCGGCCGG GGCCGACGCC GTGGTGATGG CCGCCGCCGT CGCCGACTTC
CGCCCCGTGC ACGCGGGCCC CACCAAGATC AAGAAGCGGG CCGGTCAGGG CCCCCCGGCC
ATCGAACTGG TGGAGAACCC GGACATCCTG GCCGGGTTGA GCCGGCCCGG CCCGGACCGC
CCGCGGGTCG TCGTCGGGTT CGCCGCCGAG ACCGGCGACG CCCACGGCAC CCCCCTGGAC
TACGGCCGCG ACAAGCTCGC CCGCAAGGGC TGCGACCTGC TGGTGGTCAA CCGGGTCGAT
GACGGCCGCG CCTTCGAGGT AGCCGACAAT GCCGGGGTCA TCCTGGCCGC CGACGGGTCG
GCGCCGGTCG AGATCCCGTT CGGGCCCAAG ACCGTGCTGG CCGCCGCCGT CTGCGATGTA
CTGGCCCCGA GGCTGTCCGG CCCGGAACCT CCGACCTGA
|
|---|
| Protein sequence | MSGPDPLVHE SVTSTQPAGA DRRPRVVVGV GGGIAAYKVG GLVRLFTEHG ADVTVVPTAA
ALRFVGAATW EALSGHPVST DVFTDIPHVK HVAAGQQADL VVIAPATADL LARAATGRAD
DLLTSTLLVT RAPVLMAPAM HTEMWTHPAT QANVATLRAR GVVVLDPAVG RLTGADTGPG
RLPEVEHIHA AAALLLARPA ALPPDLAGRR VVISAGGTRE PLDPVRFLGN RSSGRQGYAL
ALVAAARGAA VTLVSANVSL APPPGVRVVE VTDARALQAA MVEHAAGADA VVMAAAVADF
RPVHAGPTKI KKRAGQGPPA IELVENPDIL AGLSRPGPDR PRVVVGFAAE TGDAHGTPLD
YGRDKLARKG CDLLVVNRVD DGRAFEVADN AGVILAADGS APVEIPFGPK TVLAAAVCDV
LAPRLSGPEP PT
|
|---|
| |