Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_4155 |
Symbol | |
ID | 8449781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 4589471 |
End bp | 4590955 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 645043204 |
Product | Fmu (Sun) domain protein |
Protein accession | YP_003203433 |
Protein GI | 258654277 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0367885 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0104097 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCAC CCCCACCGCG CCGCGCCGGC GCCGGGCGCC CCTACCGCGG CGGCGCTCGC AAGGGTCCGG CCGGACCGCC GCGGCGGCCG CCGACCCTGC GCCCGCCGAT CGACGACCCG GCCCGGCAGG CCGCCCTGGA TCTGCTGGCC GCGGTCCGCA GCCGCGGCGC GTACGCCAAC CTGGCGTTGC CGCCGATCCT GCGCGACCGG CGGATCGGCG GCCGGGACGC CGCGCTGGCC ACCGAGCTGG CCTACGGCAG TTGCCGGGCG CTGGGCCAGC TGGATGCGGT GATCACCGCC TGCGGCGACC GTCCGTTCGC CGAGCTCGAT GGGGAGGTGA TCGACGCCCT TCGGCTGGGC GCCTACCAGC TGCTGCACAC CCGGATCCCG CCGCACGCCG CCGTCTCGTC CACCGTCGAA CTGGTGCGGG CGGGCGATCG CGCCGGCGCC GCCGGGTACG TCAATGCGGT GCTGCGCCGG ATCGCCGAGG CCGACCTGGA CACCTGGGTG CAGCGGCTCG CGCCGCCCGC GGAGCAGGAC CGGCTCGGCC ATCTGGCCAT GGCCACCGCC CACCCGCGGT GGATCGTCAG TGCCCTGGCC GACCGCCTGG CCCCGGACAC GGCCACACCC ACGGCCAGCA ACACAGACAC CGACACCGCC ACGGACGAGC TGGAGAAGGC CCTGAGGGCC GACGACGTGC CGCCCACGGT GCACCTGGTC GCCCGCCCCG GGCTGATCGG GCGGGACGAG CTGGTCACGG CCTCCGGGGG GACCCCGGCC CAGTACTCGC CGTACGGGGT CTACCTGCAC GGCACCGACC CCGGCCGGGT CTCGGCGGTG GCCGACGGCC GGGCGGCGGT GCAGGACGAG GGGTCGCAAC TGGTGGCGAC GGCGCTGGCC ACCGCCACCC TGGACGGACC CGACGAGCGG TGGTTGGACC TGGCCGCCGG ACCCGGCGGC AAGGCCGGGC TGCTCGGTGC GTTCGCGGCC GGGCGGGGCG CGCACCTGGA CGCCGTGGAG ATCGGGCCGC ACCGGGCCGA TCTGGTCCGC CGCACGACGG CCGGCCTGCC GGTCACCGTG CACACGGCGG ACGGCCGGGC CAGCGGGCTG GACGAGGACG CCTACGACCG GGTCCTGCTG GACGCACCGT GCACCGGATT AGGGGCGTTG CGCCGCCGGC CGGAGTCGCG GTGGCGGCGC ACCCCGAGCG ACGTACCCGA GCTGGTCGAG CTGCAGCAGG AGTTGCTGGC TGCGGCGGCC CGGCATGTCC GGGTCGGTGG GTTGATCGCC TACGTCACCT GCTCACCGCA TCTGGCCGAG ACGCTCGGCG TCGTCGGGCG GCGGCCCGAC CAGCTGGAGC TGTGCGACGC CCGGCCGTTC CTGCCGGGTG TGCCCGCGCT GGGCGACGGA CCCACCGTGC AGCTTTGGCC TCATCGGCAG GGCACCGACG GCATGTTCCT GGCCCTGTTG CGCCGGACCG GCTGA
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Protein sequence | MTSPPPRRAG AGRPYRGGAR KGPAGPPRRP PTLRPPIDDP ARQAALDLLA AVRSRGAYAN LALPPILRDR RIGGRDAALA TELAYGSCRA LGQLDAVITA CGDRPFAELD GEVIDALRLG AYQLLHTRIP PHAAVSSTVE LVRAGDRAGA AGYVNAVLRR IAEADLDTWV QRLAPPAEQD RLGHLAMATA HPRWIVSALA DRLAPDTATP TASNTDTDTA TDELEKALRA DDVPPTVHLV ARPGLIGRDE LVTASGGTPA QYSPYGVYLH GTDPGRVSAV ADGRAAVQDE GSQLVATALA TATLDGPDER WLDLAAGPGG KAGLLGAFAA GRGAHLDAVE IGPHRADLVR RTTAGLPVTV HTADGRASGL DEDAYDRVLL DAPCTGLGAL RRRPESRWRR TPSDVPELVE LQQELLAAAA RHVRVGGLIA YVTCSPHLAE TLGVVGRRPD QLELCDARPF LPGVPALGDG PTVQLWPHRQ GTDGMFLALL RRTG
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