Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_4144 |
Symbol | infC |
ID | 8449770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 4579511 |
End bp | 4580194 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 645043193 |
Product | translation initiation factor IF-3 |
Protein accession | YP_003203422 |
Protein GI | 258654266 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0415962 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000102893 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGTCCG GGATCCGGGG TGAGGGCTCT GCGCGTTTCG CGCCGGGCCC TTTTTTCGTG TGTCACCGCC GACACCGGAT GGGACCGGTG GGCGGGGTCG CGGCACGAGG AATCAACCGT CTGCAGGAGG ACTCAATCAG CGTCGAGCCA CGCATCAACG ACAGGATCCG CGTTCCCGAG GTACGTCTCG TCGGGTCGGA GGGGGAGCAG GTCGGCATCG TGCCGATCGG CGAGGCACTG CGCATGGCGC AGGAGGCCGA CCTCGACCTG GTCGAGGTTG CCCCGGACGC CCGGCCTCCG GTCTGCAAGC TCATGGACTA CGGCAAGTTC AAGTACGAGA GCGCGCAGAA GGCCCGTGAG GCCCGCCGGA ACCAGGTCCT GACGGTTATC AAGGAAATGA AGCTTCGGCC GAAGATCGAT TCGCACGACT ACGAGACCAA GAAGGGTCAC GTCGTGCGGT TCCTCAAGGC CGGGGACAAG GTCAAGGTCA CGATCATGTT CCGCGGTCGG GAGCAGTCCC GTCCGGAACT CGGGTTCCGT CTGCTGCAGC GGCTGTCCGC CGATGTCGCC GAGCTGGGAT TCGTGGAGAG CGCGCCCAAG CAGGACGGGC GCAACATGAT CATGGTTCTG GCCCCCCACA AGCAGGTACG ACCCCGCCAG GGACAGCCGG CGGCCGCATC CTGA
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Protein sequence | MSSGIRGEGS ARFAPGPFFV CHRRHRMGPV GGVAARGINR LQEDSISVEP RINDRIRVPE VRLVGSEGEQ VGIVPIGEAL RMAQEADLDL VEVAPDARPP VCKLMDYGKF KYESAQKARE ARRNQVLTVI KEMKLRPKID SHDYETKKGH VVRFLKAGDK VKVTIMFRGR EQSRPELGFR LLQRLSADVA ELGFVESAPK QDGRNMIMVL APHKQVRPRQ GQPAAAS
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