Gene Namu_4144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4144 
SymbolinfC 
ID8449770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4579511 
End bp4580194 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content66% 
IMG OID645043193 
Producttranslation initiation factor IF-3 
Protein accessionYP_003203422 
Protein GI258654266 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0415962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000102893 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGTCCG GGATCCGGGG TGAGGGCTCT GCGCGTTTCG CGCCGGGCCC TTTTTTCGTG 
TGTCACCGCC GACACCGGAT GGGACCGGTG GGCGGGGTCG CGGCACGAGG AATCAACCGT
CTGCAGGAGG ACTCAATCAG CGTCGAGCCA CGCATCAACG ACAGGATCCG CGTTCCCGAG
GTACGTCTCG TCGGGTCGGA GGGGGAGCAG GTCGGCATCG TGCCGATCGG CGAGGCACTG
CGCATGGCGC AGGAGGCCGA CCTCGACCTG GTCGAGGTTG CCCCGGACGC CCGGCCTCCG
GTCTGCAAGC TCATGGACTA CGGCAAGTTC AAGTACGAGA GCGCGCAGAA GGCCCGTGAG
GCCCGCCGGA ACCAGGTCCT GACGGTTATC AAGGAAATGA AGCTTCGGCC GAAGATCGAT
TCGCACGACT ACGAGACCAA GAAGGGTCAC GTCGTGCGGT TCCTCAAGGC CGGGGACAAG
GTCAAGGTCA CGATCATGTT CCGCGGTCGG GAGCAGTCCC GTCCGGAACT CGGGTTCCGT
CTGCTGCAGC GGCTGTCCGC CGATGTCGCC GAGCTGGGAT TCGTGGAGAG CGCGCCCAAG
CAGGACGGGC GCAACATGAT CATGGTTCTG GCCCCCCACA AGCAGGTACG ACCCCGCCAG
GGACAGCCGG CGGCCGCATC CTGA
 
Protein sequence
MSSGIRGEGS ARFAPGPFFV CHRRHRMGPV GGVAARGINR LQEDSISVEP RINDRIRVPE 
VRLVGSEGEQ VGIVPIGEAL RMAQEADLDL VEVAPDARPP VCKLMDYGKF KYESAQKARE
ARRNQVLTVI KEMKLRPKID SHDYETKKGH VVRFLKAGDK VKVTIMFRGR EQSRPELGFR
LLQRLSADVA ELGFVESAPK QDGRNMIMVL APHKQVRPRQ GQPAAAS