| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4141 |
|---|
| Symbol | |
|---|
| ID | 8449767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 4577717 |
|---|
| End bp | 4578532 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 645043190 |
|---|
| Product | tRNA/rRNA methyltransferase (SpoU) |
|---|
| Protein accession | YP_003203419 |
|---|
| Protein GI | 258654263 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.000328587 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.000303347 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCTCACCG AGCGGTCCAA CCGCATCGTG GCCGCGCACA AGCTGCTGCG TCGCTCGCGG
CGGGTCGAGG CCGGCGAGTT CCTGGCCGAG GGTGCCCCCG CGGTCGCCGA GGCCATCGCC
CATGCCGCCG AGAACCCGGG GGCGGTCCTC GAGCTGTACC TGACCGCCGC GGCCGGCGCC
CGGCACACCG AGTTGGTGCG GCGGGCCTAC GCCGCCGGGA TCACGGTCAC CCAGGTCACC
GACCGGGCCG CGGCCTCGCT CAGCGACGCG GTCAGCCCGC AGGGCCTGGT GGTGCGCTGC
GCGTTGCCGA TGACCTCGGT GGCCGACCTG CTGGCCGGCT CGCCCAAGCT GGTCGCGGTG
CTGGTGCAGA CCAGCGACCC CGGCAACACC GGCACGGTGA TCCGGCTGGC CGACGCGGCC
GGCGCCGATG GCGTCATCGT CGCCGGGGAG GCCGCCGACC CGTGGAACGC CAAGGCGATC
CGGGCCTCCG CCGGCAGCGT GTTCCACCTG CCGGTGGTGC CCGCGCGGGA CCCGGCCGCT
CTGATCGGCG AGCTCACCGC CGCCGGGCTC TCGGTGCTGG CCTCCACCGG GCAGGCCGAC
GTCGAGCTCG GCTCGGCCCA GGCCGAGGGC ATCCTCGACC TGCCGACGGC CTGGCTGTTC
GGCTCCGAGG CGCACGGCCT GCCGGCCGAA ATCATCGGCC GGGCCGACGA GCGGATCCGG
ATCCCGATCT ACGGCCGGGC CGAGTCGCTG AACCTGGCCG CGGCCGCCGC GGTCTGCCTG
TACGCGAGCG CCACCGCGCA CCGCCGGACG CACTGA
|
|---|
| Protein sequence | MLTERSNRIV AAHKLLRRSR RVEAGEFLAE GAPAVAEAIA HAAENPGAVL ELYLTAAAGA
RHTELVRRAY AAGITVTQVT DRAAASLSDA VSPQGLVVRC ALPMTSVADL LAGSPKLVAV
LVQTSDPGNT GTVIRLADAA GADGVIVAGE AADPWNAKAI RASAGSVFHL PVVPARDPAA
LIGELTAAGL SVLASTGQAD VELGSAQAEG ILDLPTAWLF GSEAHGLPAE IIGRADERIR
IPIYGRAESL NLAAAAAVCL YASATAHRRT H
|
|---|
| |