Gene Namu_4074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4074 
Symbol 
ID8449694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4490342 
End bp4491160 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content73% 
IMG OID645043118 
Producthemolysin A 
Protein accessionYP_003203353 
Protein GI258654197 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0198624 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.017914 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTAGGA GCCGGCTGGA CGCGGAACTG GTGCGGCGCG GCCACGCCCG TTCCCGCGCC 
GAGGCCGCCG AATTCATCGC CGCCGGCCGG GTGCTGGTCG CCGGTCAGGT CGCCACCAAG
CCGTCCACCG CGGTCGACCC GGCGGTCGCG CTGCTCGTTC GTGACGCCGA TCTGGACCCG
CGGTGGGCCT CCCGGGGTGC GCACAAGCTC ATCGGTGCGC TGGACGCGTT CACCGACGTC
GTCGTCGACG GTCGGCGCTG CCTGGACGCC GGGGCCTCCA CCGGCGGCTT CACCGACGTG
CTGCTGCGGC GCGGAGCCCG TGAGGTGGTC GCCGTCGACG TCGGCTACGG GCTGCTGGTC
TGGGCCCTGC AGAGCGATGA GCGGGTGCAC GTGCACGACC GCACCAACAT CCGTCACCTC
ACCCCCGAGG CCATCGGCGG CCCGGTCGAC CTGGTGGTGG CCGACCTGTC CTTCATCTCG
CTGACCCTGG TGCTGCCCGC GCTGATCGCC TGCGCGCACC CGGACGCCGA CCTGATCCCC
ATGGTCAAGC CGCAGTTCGA GGTCGGCAAG GAGCGGCTCG GTGCCGGCGG AGTCGTCCGC
GATCGGGCGC TGCGCGCGGA GGCGGTGGCG ACGGTCGTGC AGGCGGCTGG TCTACTGGGG
TGGGGCATGG CCGGCGTGGT CGCCTCGCCG CTGCCCGGAC CGAGCGGGAA TGTGGAGTTC
TTCGTGCATC TGCGACGCGA CACGGCGGTC GAGGATCCGT TCGCCGACGG CCGCTGCGCC
GAGCTGATCG CGACGGCAGT GGGGGAGGGA CCGGCATGA
 
Protein sequence
MRRSRLDAEL VRRGHARSRA EAAEFIAAGR VLVAGQVATK PSTAVDPAVA LLVRDADLDP 
RWASRGAHKL IGALDAFTDV VVDGRRCLDA GASTGGFTDV LLRRGAREVV AVDVGYGLLV
WALQSDERVH VHDRTNIRHL TPEAIGGPVD LVVADLSFIS LTLVLPALIA CAHPDADLIP
MVKPQFEVGK ERLGAGGVVR DRALRAEAVA TVVQAAGLLG WGMAGVVASP LPGPSGNVEF
FVHLRRDTAV EDPFADGRCA ELIATAVGEG PA