Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3928 |
Symbol | |
ID | 8449547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 4335361 |
End bp | 4336893 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 645042974 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diamin opimelate/D-alanyl-D-alanylligase |
Protein accession | YP_003203210 |
Protein GI | 258654054 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.340087 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.271745 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCGC TGACCCTGGC TCAGATCGCC GACGAGATCG GGGTTCCCGT GCCCGCCGGA GCGGCGGACG TGCTGGTGAG CTCGGTCGAG TTCGACACCC GCCGGATCCG CCCGGGGGCG TTGTTCGTCG CCCTGCGCGG CGAGCGGGTG GACGGGCACG ACTTCGCCGC CACGGCCGCC GCCGCCGGCG CGGTGGCGGT GCTGGGGTCG GCCCCGGTGT CGGCCCCGCT GCCGCTGCTG CAGGTGCCCG ACCGCCCCGA CAACGCCGGC GTGCTCGACG CGTTGGCCGC CCTGGCCCGG GCGTCGGTGA CCGCGCTGGT CCGCGAGCAC GGCCTGCAGG TCGTCGGCGT CACCGGGTCC TCCGGCAAGA CCTCGACCAA GGACCTGATC GCGGCCGTCC TGCGCGCCGT GCCGGGGACC GGTCCCGAAC GGGTCATCGC CCCGCCGGAG TCGTTCAACA ACGAGCTGGG CCACCCGTAC ACCGCACTGC GGGCCGACGA GAGCACCGCG TTCCTGGTGC TCGAGCTGTC CGCGCGGGGC GCCGGCCACA TCGCCGCGCT GGCCCGGGTC GCGCCGCTGC GGATCGGGGC CGTGCTCAAC GTCGGCTCCG CCCACCTGGG CGAGTTCGGG TCGGTCGAGG CCATCGCGCA GGCCAAGTCC GAGCTGGTCC AGTCCTTGCC CCCGGCCGGT GCCCAGCCGC TGACGGGTGG GGTGGCGATC CTGAACGCCG ACGACGCCCT GGTCGCGGCG ATGGCCGAAC TGACCGCGGC CGAAGTGGTC ATGGTCGGCA CGGGCGCGGC GGCCCAGGTG CGGGCCACCG ACGTCGGCCA GGACGACGCC GACCGGGCCC GGTTCACCCT GGTCACCCCG GAGGGGTCGG CCCCGGTGAC GCTGCGCGTG GTCGGCGCGC ACCAGATCGG CAACGCGTTG ACCGCGGCCG CGGTCGGTCG CGCGGTCGGG CTGGGCCCGC AGGCCATCGC CCGCGCGCTG TCGCAGGCCG AGCCGGCGTC GCGGTGGCGG ATGGAGGTCA CCGAGCTGGC CAACGGCGTC ACCCTGATCA ACGACGCGTA CAACGCCAAC CCGCACTCGA TGAAGGCCGC CCTGCACTCG CTGTCCACCA TCGGCCGCGG CCGGCGGACC TGGGCGGTGC TGGGGGAGAT GGCCGAGCTG GGCGACGAGG CGACCGCGGC GCACGACCAG ATCGGCCGCC TGGTGGTCCG CCTGGGAGTG GACCGGCTGC TGGTGGTCGA GGGGCCCGGC GCGGCCACCG GGGCCGCCGT GGGCGGCCGC ACGGCCCCGC GGGCGCTGCA CCTGGGCGCG CACTTGGAGG GGTCGTGGGG TGGCGAGTCG GAGCTGGTGC CCGACGTCGA CGACGCGGTG GCGATCCTGC TCGACGAACT GGAGCCCGGT GACGTGGTGC TGGTCAAGGC GTCCCGGTCG GCCGGGCTGG AACGGGTCGC GCTGCGGCTG ATCGAGGCCG TCGGGGCATC GGCCGGCCGG CTGGCCGGCG ACCGGAAGGA CGGCCCCGCG TGA
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Protein sequence | MIALTLAQIA DEIGVPVPAG AADVLVSSVE FDTRRIRPGA LFVALRGERV DGHDFAATAA AAGAVAVLGS APVSAPLPLL QVPDRPDNAG VLDALAALAR ASVTALVREH GLQVVGVTGS SGKTSTKDLI AAVLRAVPGT GPERVIAPPE SFNNELGHPY TALRADESTA FLVLELSARG AGHIAALARV APLRIGAVLN VGSAHLGEFG SVEAIAQAKS ELVQSLPPAG AQPLTGGVAI LNADDALVAA MAELTAAEVV MVGTGAAAQV RATDVGQDDA DRARFTLVTP EGSAPVTLRV VGAHQIGNAL TAAAVGRAVG LGPQAIARAL SQAEPASRWR MEVTELANGV TLINDAYNAN PHSMKAALHS LSTIGRGRRT WAVLGEMAEL GDEATAAHDQ IGRLVVRLGV DRLLVVEGPG AATGAAVGGR TAPRALHLGA HLEGSWGGES ELVPDVDDAV AILLDELEPG DVVLVKASRS AGLERVALRL IEAVGASAGR LAGDRKDGPA
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