Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3889 |
Symbol | |
ID | 8449508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 4290808 |
End bp | 4292175 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 645042936 |
Product | transposase mutator type |
Protein accession | YP_003203172 |
Protein GI | 258654016 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3328] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00321636 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0880622 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGATTG ATGGCATGCC GAGATTGACC CCGCAGGAGC GGGCCGAGCG TCGTCGGGTG CAGGCTGAGT TGGCTGCGGA TCTGAAGGCC TCGGGTGCGC TGGACGGGGT GTTCGCCCGC ATCGATGCCG GGGAGCCGCT GACCGGCGAC AGCGGGGTGC TGGGCGGGAT GCTCAAGGCT GCGTTGGAAC GCGGTCTGGA AGCGGAGCTG ACCGACCACG TCGGCTACGA CAAGGGCGCC GTGGACGCGG CCGAGTACGA CAATTCCCGC AACGGTCACT ACGCCAAGAC GGTGTCCAGC GAGATCGGTG ACATCGAATT GCGGGTCCCT CGGGACCGGG CCGGGACGTT CACCCCGATG CTGGTCGGCA AGGGGCAGCG CCGGCTGGAC GGCATCGACG GGATGATCAT CTCGCTGTAC GCGGGCGGGA TGACGTTGCG GGACATCGCC CACCACCTGG CGACCACGGT CGGGGTGGAC CTGTCCCACG AGACGATCAG CAAGATCGTG GACGCGGTCG CCGACGAGGT CCTGGCCTGG CAGCGCCGTC CGTTGGAGCC GATCTACCCG GTGATCTATC TGGACGCCAT CACCGTCAAG ATCAAAGACG GCGGACACGT GGTGAACAAG GCCGCGAACC TGGCCGTCGG GGTCGACATG GAAGGTATCA AGCACGTTCT CGGGATCTGG GTGCAAACCC ATGAGGGCGC CAAGTTCTGG GCCGGGGTGT GCGCCGACCT GGCCAACCGC GGCGTGCAAG ACGTGCTGAT CGTGTGCTGT GACGGGCTCA CAGGGTTCCC CGAGGCCATC GCGGCGACCT GGCCGGCCGC GACCGTGCAA ACCTGCGTGG TCCACCTGAT CCGCGCGTCG ATGCGGTTCG TGTCCTACGG CGACCGCAAA GCCGTCGCTG CCGCGGTCAA ACCGATCTAC ACCGCCAGCT CCGAAGAGGA CGCCCTCGCC GCCTTGGAGG CGTTCCGGGA CGGGCCCTGG GGGTCGAAGT ACCCGTCGGC GGTCCGCTCG TTCCAGGCGG CGTGGGACCG GTTCACCCCG TTCCTGGCGT TCCCGCCGGC CCTGCGCCGG GTCATCTACA CCACCAACGC GATCGAGTCG CTGAACTATC AGTTGCGCAA GGTCACCAAG AACCGCGGCC ACTTCCCCAA CGACGCAGCC GCGGTCAAGC TGCTGTGGTT GGCGATCTGC AACATCGAGG ACAAACGAGC CCGCGACCGG GAGAAAGAGC GCGGACTACC CGCCGCCGAC CGACGAGCGT CCGGACGCCT CATCCAAGGC GCCGTCACCA CCAACTGGAA AGCAGCGCTG GCCCAACTCG CCCTGGTCTA TCCCGACCGA ATCGAACCCC ACCTGTAA
|
Protein sequence | MTIDGMPRLT PQERAERRRV QAELAADLKA SGALDGVFAR IDAGEPLTGD SGVLGGMLKA ALERGLEAEL TDHVGYDKGA VDAAEYDNSR NGHYAKTVSS EIGDIELRVP RDRAGTFTPM LVGKGQRRLD GIDGMIISLY AGGMTLRDIA HHLATTVGVD LSHETISKIV DAVADEVLAW QRRPLEPIYP VIYLDAITVK IKDGGHVVNK AANLAVGVDM EGIKHVLGIW VQTHEGAKFW AGVCADLANR GVQDVLIVCC DGLTGFPEAI AATWPAATVQ TCVVHLIRAS MRFVSYGDRK AVAAAVKPIY TASSEEDALA ALEAFRDGPW GSKYPSAVRS FQAAWDRFTP FLAFPPALRR VIYTTNAIES LNYQLRKVTK NRGHFPNDAA AVKLLWLAIC NIEDKRARDR EKERGLPAAD RRASGRLIQG AVTTNWKAAL AQLALVYPDR IEPHL
|
| |