Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3755 |
Symbol | |
ID | 8449374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 4121768 |
End bp | 4123816 |
Gene Length | 2049 bp |
Protein Length | 682 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645042806 |
Product | amino acid transporter |
Protein accession | YP_003203042 |
Protein GI | 258653886 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000328435 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.279832 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCAAGC TGACCACGGC CGCCAAGCGC TTGCTGGTCG GGCGGCCCTT CCGAAGCGAC AAGCTCGCGC ACACCTTGTT GCCCAAGCGG ATCGCCCTGC CGGTGTTCGC CTCCGACGCG CTGTCCAGCG TGGCGTACGC GCCGCAGGAG ATCTTCGCGG TGCTCTCGGT CGCCGGGCTC GCCGCCTACG CCTACGCCCC CTGGATCGCC GGCCTGGTCG CGCTGGTGAT GATCGTGGTC GTCCTGTCGT ACCGGCAGAA CGTGCACGCC TACCCCAGCG GCGGCGGCGA CTACGAGGTC GTCACCAAGA ACCTGGGCCC GACGTACGGG CTGCTGGTGG CCAGCGCGTT GCTGGTCGAC TACATCCTGA CGGTGGCCGT GTCGACGGCC GCGGGCGTGG CCAACATCGG ATCGGCGATC CAGGTGGTGG GCGATCACCC GGTGTGGTTC TCCATCGGGA TCATCGTGCT GGTCTGTGCG TTGAACCTGC GCGGCATCCG GGAGTCCGGG TCGGCCTTCG CCATCCCGGT CTATGCGTTC ATCATCTCGA TCGTCGCGAT GATCATCACC GGCCTGGTGG AGTTCGTCAT CGGCGCCGAC GTCAAGGCGC AGAGCGCGGA CTTCCACCTG CAGGCCGAGT CCGCCCTGAC CGGGTTCGCC CTGGTCTTCC TGCTCCTGCG GGGCTTTTCC TCCGGCTCGG CCGCGCTCAC CGGCGTCGAG GCGATCTCCA ACGGCGTGCC GGCGTTCAAG AAGCCCAAGT CGCGCAACGC GGCCACCACG CTGGCCCTGA TGGCCGCCTT GTCGGTGTCG ATGATGCTGG GGCTGGTGGC GCTCACGCTC TACACCGGCG TGCAGTTCGC CGACGATCCG GCCACCCAGC TGATCGGCGC CCCCGAGGGC TACTACCAGA AGACGTTGAT CGCCCAGATC GCGGAGGCCG TCTTCTCCGG GTTCCCGTTG GCCTTCTACA TCGTCTCGTT CACCACCGGC CTGATCCTGG TGCTGGCCTG CAACACGGCG TTCAACGGCT TCCCGGTGCT CGGTTCGATC CTGGCCCAGG ACCGGTTCCT GCCCCGGCAG TTGCACACCC GCGGCGACCG GCTGGCCTTC TCCAACGGCA TCGTTTTCCT GGCCGCGATC GCGCTGATCC TGGTGATCGC GTTCCAGGCC GACGTCACCG CACTGATCCA GCTCTACATC GTCGGGGTGT TCGTCTCGTT CACCTTCTCC CAGTTGGGCA TGATCAAGCA CTGGAACAAG CTGCTGCGCA CCGAACGCGA CGGGGCGGTC CGCCGGCGCT ACCGCCGGTC GCAGACCATC AACGCGGTCG GCTTCTGCTT CACCGGCGTG GTGCTGATCA TCGTGCTGAT CACCAAGTTC CTGGCCGGCG CGTGGATCGC CCTGCTGGCC ATGGCGGTCA TCTTCGTCAC CATGCAGGCC ATCAAGCGGC ACTACGAGCG GGTCGCCCAG GAGATCGCCG CCGACGAGGA CGATCTGGTG CTGCCCAGCC GGGTGCACGC CATCGTGCTG GTCTCCAAGC TGCACCTGCC GACCATGCGG GCGCTGGCGT TCGCCCGAGC CACCCGGCCC GACACCCTGG AGGCGGTCAC CGTCAACGTC GATCCCGAGG ACACCGCCGA TCTGGCCCGG GAGTGGGAGG ACCGGCAGAT CCCGGTCTCG CTCAAGGTCA TCGACTCGCC GTTCCGGGAG ATCACCAAGC CGGTGCTGGA CTACGTGCGC CGGGCCCGCA AGAACGCGCC CCGCGACGTG GTCACCGTGT TCATCCCCGA GTACGTGGTC GGGCACTGGT GGGAGCACCT GCTGCACAAC CAGTCCGCGC TGCGGCTCAA GGGCCGGCTG CTGTTCACCC CGGGCGTCAT GGTCACCTCG GTGCCCTGGC AGCTGTCCTC GTCCGAGGCG CTGGACGAAC GGATCCGGCT GCGCGCCGAA CGATCGCCCT ACATCCGCGG CCGCAAGCCC GGCTCGCTGA TCCCGCCCGA CGGCGCCAGC GACACCGGCA CCTTCGAGAT CCGTTACGGG GACGAGTGA
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Protein sequence | MSKLTTAAKR LLVGRPFRSD KLAHTLLPKR IALPVFASDA LSSVAYAPQE IFAVLSVAGL AAYAYAPWIA GLVALVMIVV VLSYRQNVHA YPSGGGDYEV VTKNLGPTYG LLVASALLVD YILTVAVSTA AGVANIGSAI QVVGDHPVWF SIGIIVLVCA LNLRGIRESG SAFAIPVYAF IISIVAMIIT GLVEFVIGAD VKAQSADFHL QAESALTGFA LVFLLLRGFS SGSAALTGVE AISNGVPAFK KPKSRNAATT LALMAALSVS MMLGLVALTL YTGVQFADDP ATQLIGAPEG YYQKTLIAQI AEAVFSGFPL AFYIVSFTTG LILVLACNTA FNGFPVLGSI LAQDRFLPRQ LHTRGDRLAF SNGIVFLAAI ALILVIAFQA DVTALIQLYI VGVFVSFTFS QLGMIKHWNK LLRTERDGAV RRRYRRSQTI NAVGFCFTGV VLIIVLITKF LAGAWIALLA MAVIFVTMQA IKRHYERVAQ EIAADEDDLV LPSRVHAIVL VSKLHLPTMR ALAFARATRP DTLEAVTVNV DPEDTADLAR EWEDRQIPVS LKVIDSPFRE ITKPVLDYVR RARKNAPRDV VTVFIPEYVV GHWWEHLLHN QSALRLKGRL LFTPGVMVTS VPWQLSSSEA LDERIRLRAE RSPYIRGRKP GSLIPPDGAS DTGTFEIRYG DE
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