Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3699 |
Symbol | |
ID | 8449318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 4061104 |
End bp | 4063263 |
Gene Length | 2160 bp |
Protein Length | 719 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645042760 |
Product | integrase family protein |
Protein accession | YP_003202996 |
Protein GI | 258653840 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0398005 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.195076 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCGTG AACCGGGCGG GGGCCTTCGG CCCGCCGAGG ACCTGGATCC CGTTCATCGG CTCTGGCTGG AGCTGCCCGA GCAGTGGCGG GGTCCGGTGA TCGGACCCGG CATCGCGAAC TGGGACCGGA TCACCGAAAA CGGCGACAGG CGAATCGATC TGACTGGGCT GCCTGACCCG TTCCCGGCCG AACTCGCGTG GATGGCGCAC TGGCAGTCCG TCGACGGGAC CCGATCGACG GTGCTGGCGA TGAACCAGCT GGCCAACATC CTGCGCCGCG CCATCCGCGA GGGGCACCCG TTCCCCACCT CGATGCTGGC CTTGGACTGG GAGACGGCCT CGGCGTTGCA GGGGTGGTTC TACGCGCACC GCTGGGGGCG GCTCCCACCC AAGGACAGCC GTAGCCGGCT GCGGGTGCTG TTCCGGTTCG CCCGGCAGGC GTTGATCGCC CGCTGCCACG ATGGCCCGTG GTGGACGCTC GACGAGTGGC ATCCACGTTG TGATCCGCGG ATACCGCTGT CGACCCGGGA ACCACAGGCC AACTACGGGT GCTCGCCCGG GCAGATCACC CAGCCCTGGC TCCGGGAAGC CGTCAAGTGG TACCTGGGGA CCCAACTGGA GTCCGGGGCG CTGCGCTGGA CGACCGTGAG CCAGGACCGG ATGAATTGCC TGCGCCGGTT CGACGTCTGG CTGACCAGTT GCCTGGACGA TCCCATCGAG GTGCTCGGCG ATCCAGCGGC GGCCGCCGGG CAGGCGGACA GATATCGACG TTGGGCCATG GAACCGGGCC ACCGGAAGAC CGGCACGTTC GACCGTCGGA CGCCCCCGAA GCCGGCCCAC CCGCGCCTGA TCAACGACGA CATCCGGGCA GTGGCAGATC TGTTCACCTT CATGGTGGCC AACCGAGACC GGGCCCACAT CGTCACCGGA TACGCCGTCT GGGATCGGGT CACCGACACC CACGTGGCCG GATGGTTCCG CCAGGTCTCC CGCATCCCGC GGACACCCAC CCTGAACGAC CGGCACTACG TCGACGACCA CGCGCTCGCC CAGATTCCGG GTGCGCTGCC GTTGCTGGGC TTGCCCCGGG ACCAACAGAT GACGATCACC CGGGGCGACG GCACCCAGGT TCTCGCCGCC GGCTTCGACG ATCCGCAGGC GATGCGGATG ATCCTGCTGC AGATCCTGAC CGGGCGTCGG TCCAGCGAGA TCCGCACGTG CGAGTTCGAT TGCCTGTCAC CGGCTCCCGA TATCTCGGTG CAGTCCGGGC AGGACCAGGA AGTCGTCCGG TTCCGCTACG CCCAAAGCAA GATCGACACC GCGCCGGACA CCATCCTGGT CGACCGCGAG GTCTCCGCGG TCATCGAGGA GCAGCAGCGT TGGGTCCGCG AACACCTGCC GGAGTTCGAA CCGCGGCATC TGTTCGTGCA GCGGACCGGG AACCGCAACG GCGACAAGCC CTACCCGCCG GGAACCTACA ACTGGATGCT CCGGGAGCTC AGCAACGTCG CGCGGATCAC CGACGGCCAG GGCCGGCAAC TGCAACTGAG CAACACGCAC CGGTTCCGAC ACACCAAGCT CACTCGGCTC GCCGAACTCG GCCTGCCCAT CCACGTCCTG CAGCGGTACG CCGGGCACGC CACACCGACC ATGTCGATGC ACTACGTGGC GCAGCGCGAG GAACACGCCG AGCAGGCGTT CCTGGCCACC GTCAAGCTGC GGGCCGACGG CAGCCGGGTC CAGTTCTCCC GTGAGGACCA CGACGGCCTG CACCTGCTCG ACCGGGCCGA CCGGTTCCTG CCCAACGGCT GGTGCCTGCT GCCCCCGCTC CAATCCTGCG ACAAGGGCAA CGCATGTTTG AGCTGCTCGG TCTTCGTCAC CGACGCGACC CACGAGCCGA CACTACGACG CCAACAGGCC GAGACCGAAG CGTTGATCAC ACGCACAACC AACGCGTTTC GGGAGAAGCA CGGTCGCGCC ATGCCCGAGG ACAATGTTTG GCTCGCGCAG CGTCGAGCCG AGCAAGCGGC GCTCACCCGG CTGTTGGACA CGATGGCCGA CCACCCCGAA CGGGCGGTGC AAGGAGGCGG ATGCGGCGCA CCTCCGACAG GCCCGGTGCC CCTGGCACTC ACCGGACCCA GGCGCAGGAC CCGGCCATGA
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Protein sequence | MRREPGGGLR PAEDLDPVHR LWLELPEQWR GPVIGPGIAN WDRITENGDR RIDLTGLPDP FPAELAWMAH WQSVDGTRST VLAMNQLANI LRRAIREGHP FPTSMLALDW ETASALQGWF YAHRWGRLPP KDSRSRLRVL FRFARQALIA RCHDGPWWTL DEWHPRCDPR IPLSTREPQA NYGCSPGQIT QPWLREAVKW YLGTQLESGA LRWTTVSQDR MNCLRRFDVW LTSCLDDPIE VLGDPAAAAG QADRYRRWAM EPGHRKTGTF DRRTPPKPAH PRLINDDIRA VADLFTFMVA NRDRAHIVTG YAVWDRVTDT HVAGWFRQVS RIPRTPTLND RHYVDDHALA QIPGALPLLG LPRDQQMTIT RGDGTQVLAA GFDDPQAMRM ILLQILTGRR SSEIRTCEFD CLSPAPDISV QSGQDQEVVR FRYAQSKIDT APDTILVDRE VSAVIEEQQR WVREHLPEFE PRHLFVQRTG NRNGDKPYPP GTYNWMLREL SNVARITDGQ GRQLQLSNTH RFRHTKLTRL AELGLPIHVL QRYAGHATPT MSMHYVAQRE EHAEQAFLAT VKLRADGSRV QFSREDHDGL HLLDRADRFL PNGWCLLPPL QSCDKGNACL SCSVFVTDAT HEPTLRRQQA ETEALITRTT NAFREKHGRA MPEDNVWLAQ RRAEQAALTR LLDTMADHPE RAVQGGGCGA PPTGPVPLAL TGPRRRTRP
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