Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3549 |
Symbol | |
ID | 8449168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 3898378 |
End bp | 3900513 |
Gene Length | 2136 bp |
Protein Length | 711 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 645042626 |
Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
Protein accession | YP_003202862 |
Protein GI | 258653706 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0257053 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0131048 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCACCC TGGAGAAGAC CCAGGACCTG ACCGCCCTGG CGGCCGACGA GGTCATCACC ACCGCCCTGA CCCGGGTGGT CGAGGTCCCC GCCCCGGGCG GCGCCGGCAG CCCGGTGCGG ATCGCCCTGA TCACCCTGGA CAACAAACGT GACCACACCC GGCCGAACAC GCTGGGCCCC GGCGGGCTGG CCAGCCTGGA CGCGGCCATC AGCACCGCGC TGGCGGCCTC GCCGGACGCG ATCGCGGTGA CCGGCAAGCC GTTCGTTTTC GCCGTCGGCG CCGACCTGTC CCAGATCGGC AAGCTCACCG ATCGCGACAC CGCCCTGGCC ATCGGGGAAT TCGGCCAGCG GGTGTTCCGC CGGCTGGGCA CCTCCGGCAT CCCCTCGTTC GCCTTCGTCA ACGGCGCGGC CATGGGCGGG GGCACCGAGC TCGCGTTGCA CTGCGACTAC CGGACCATGG CCAGCAACGC CGCGTTCGTC GCGCTGCCCG AGGTGTTCCT GGGCCTGCTG CCCGGTTGGG GCGGCACCCA GCTGCTGCCC CGCCTGATCG GGCCGGAGAA CGCGGTCACG GTGATCATCG AAAACCCGCT CAACCAGAAC CGGATGCTCA AGCCCAAGGA CGCGCTGCGG CTGGGCGTGG TCGACACCGT GCTGGACGCC GCCGACTACC TGGAGCAGTC CCTGGCCTGG GCCGCCGGCA TCGTCGCCGG GTCCACCTCG GTGCCGCGCA CCGCGTTCGC CGGCGCCACC GACGAGGACT GGGCGGCCGC CCTGGAGCGC GGGAAGGTCA TCGCCGACAT GCGCACGCAC GGCGCCGCGC CGGCGCCCTA CCGGGCCCTG GAGATGATCG AGCTGTCCCG GACCGCGCCG CTGGGCGAGG GCCTGCGCGA CGAACGGGAG GCGCTGGCCG ACCTGGTGAT GAGCCAGGAG TTCCGGGCCG GGATCTACGC CTTCAACCTG GTGCAGAAGC GGGCCCGCAA GCCGGTCGGC GCCCCCGATC CGAAGCTGGC CCGGCCGGTC ACCAAGGTCG GGGTGGTCGG TGCCGGACTG ATGGCCGGGC AGATCGCCCT GCTCTTCGCC CGCAACCTCA AGGTGCCGGT GGTGCTCACC GACGTCGACC AGACCCGCCT GGACAAGGGA CTGGCCGCGA TCGGCCGCGA CATCGAGGGA CTGAAGGGCA AGAAGCGGAT CACCGCCGAC GAGGCGAACC GGCTGACCGC GTCCATCACC GGTTCGCTGG ACTACGACGC CTTCGCCGAC GCCGAGTTCG TCATCGAAGC GGTGTTCGAG GAGCTCGAGG TCAAAAAGCA GGTGTTCGCC ACGCTGGAGA AGCACGTGGC CGCCGACGCG GTGCTGGCCA CCAACACCTC CTCGCTGTCG GTGACCGCCA TGGCGCAGGA TCTGGACCAC CCGGAGCGCG TGGTCGGATT CCACTTCTTC ACGCCGGTGG CCGTGCTGCC GATGCTGGAG ATCATGAAGG CGGCCAAGAC CGATGACGTC ACCTTGGCCA CCGCGTTCGC GCTGGCCAAG GGACTGCGCA AGGGACCGAT CCTGACCGCG GACGCGGCCG GGTTCGTGGT CAACCGGCTG CTGCTGCGCA GCATGGGCGA GGTGCTCGCG GCGATCGACG AGGGCACCCC GGCCGACGTC GCCGACGAGG CCCTGGCCCC GCTGGGCATG CCGATGTCGC CGCTGATGCT GCTGCAGCTG TCCGGCCCGG GGGTGGCCGC GCACGTGCAG CAGAGCCTGC ACGCCGCGTT CGGCGACCGG TTCCCGGTGT CGCAAAGCCT GCAGCGGATC GCCGAGGCCG GTCACCGGAC GCTGCTGACC TGGGACGAGC AGGGCCGTCA GGTGCTCGAC CCGGAGGTCG CCGCCCTGCT GGTGCAGGGC GACCGGCCCT CGACCGCGGA GCAGGTCCGC GAGCGGGTCC TACTCGCGCT GGCCCAGGAG GCCCGGCTGA TGCTCGACGA GGGTGTCGCG GCCGATGCCG CCGATCTGGA CCTAGGCCTG ATCACCGGCG CGGGGTGGCC GTTCTGGCTG GGCGGGATCA CCCCGTACCT GGACCGAGAG GGCTATTCCG AGCGGGCCAC CGGCCGCCGG TTCGCCCCGC CCGGGGTGGC CACCCTGCCG GCCTGA
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Protein sequence | MSTLEKTQDL TALAADEVIT TALTRVVEVP APGGAGSPVR IALITLDNKR DHTRPNTLGP GGLASLDAAI STALAASPDA IAVTGKPFVF AVGADLSQIG KLTDRDTALA IGEFGQRVFR RLGTSGIPSF AFVNGAAMGG GTELALHCDY RTMASNAAFV ALPEVFLGLL PGWGGTQLLP RLIGPENAVT VIIENPLNQN RMLKPKDALR LGVVDTVLDA ADYLEQSLAW AAGIVAGSTS VPRTAFAGAT DEDWAAALER GKVIADMRTH GAAPAPYRAL EMIELSRTAP LGEGLRDERE ALADLVMSQE FRAGIYAFNL VQKRARKPVG APDPKLARPV TKVGVVGAGL MAGQIALLFA RNLKVPVVLT DVDQTRLDKG LAAIGRDIEG LKGKKRITAD EANRLTASIT GSLDYDAFAD AEFVIEAVFE ELEVKKQVFA TLEKHVAADA VLATNTSSLS VTAMAQDLDH PERVVGFHFF TPVAVLPMLE IMKAAKTDDV TLATAFALAK GLRKGPILTA DAAGFVVNRL LLRSMGEVLA AIDEGTPADV ADEALAPLGM PMSPLMLLQL SGPGVAAHVQ QSLHAAFGDR FPVSQSLQRI AEAGHRTLLT WDEQGRQVLD PEVAALLVQG DRPSTAEQVR ERVLLALAQE ARLMLDEGVA ADAADLDLGL ITGAGWPFWL GGITPYLDRE GYSERATGRR FAPPGVATLP A
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