| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3449 |
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| Symbol | |
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| ID | 8449064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3792093 |
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| End bp | 3793289 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 645042525 |
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| Product | transcriptional regulator, CdaR |
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| Protein accession | YP_003202765 |
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| Protein GI | 258653609 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00146797 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00488503 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGACGA CGTCGCCCGA CCCCAGGCGG GCCATCGCCG CGGCCGCGGT GCGCGATGCC
GGGGTGGCCG ACGAGGAGCT GCTCGGGGAC TTCATCGCCA CCCTGGCGGC CACCGTGGCC
GCCGGTGAAC GGCTGCCCCG GGCGGCCCGG CGCCGGTGCG CGGACAGCGG CCGGCGGGCC
GCGGTCTCCG GGGTGCCGCT GCGGGCGCTG CTGGATCTGC ACCTGTCGGT CGCCTGGCGG
CTCTGGCGGC ACGTCGCCCC GGCCGACGAT CCGCAGGACC CCGTGCAGTC GGTCGTCCGG
GCCGGCGAGG TGATGCTGCG GGCCATCGAC GACGCGGTCG CCGCGCTGAC CGAGGGCTAC
CAGCTGGCCC GGCGTCAGGT GGTGGCCGAG CAGGCCGCGG CCCGCCGGGA GTTCGTCGAC
GACCTGCTGC TCGGCGGCGC CCAGGCCGCC GTCGGGCTGG CCGAACGGGC CGGCGAGTTC
GGGCTGAATC TGGCCGGTCC GCACGCGGTC GTCGTCGTCC GGGCGCAGCG GCCGTTCGTC
GAGTCCTCGC CGCTGACCTC GATGCTGGAG CGATCCCTGA TGGGCGCCAA AGCCGACGCC
GACGCGCTGG TCACCACCAA GGACGATGCC CTGGTCGTGG TGTTCGCCGC GCCCGACCGG
GCCGCGGTCG ACCAGGTGGT GAGCGCCCTG ACCGCCAACC TGCCGGCGCC CGAGGCCGAG
GCCGGTGTCC GGCTGCACCG GGTGGCCGCC GTCGGCGCCT GGCGAATGGG CGTCGGCCGC
GCCCACCCGG GGCCGGCCGG GGTCGGCCAG TCCTACGCCG AGGCGATCGA CGCGCTGGCC
CTGGGTCAGC GGCTGGGCCT GCCGGAACCG GTGGTCGACG CCGCCGACCT GTTGCTGTAC
CGGGTGCTGG TGCGTGACGA GGCGGCCATG CGGGAACTCG TCGACGCCGT GCTGGCCCCG
CTGGTCGGGG CCCGCGGCGG GGCCGAGCCG CTGCTGCAGA CTCTGGACGC CTACTTCGGC
GCCGGCGGCA ACGCGACCCT GGCCGCGCGC TCGTTGCACC TGTCGGTGCG GGCCCTGACC
TACCGGCTGG CCAAGATCGC CGATCTGACC GGGCGCGACC CGGTCGACCC CCGGCACCGG
CTGGAGCTGC AGACCGCCCT GGTCGGGGCG CGTCTGCTCG GGATGACCGG AACATGA
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| Protein sequence | MPTTSPDPRR AIAAAAVRDA GVADEELLGD FIATLAATVA AGERLPRAAR RRCADSGRRA
AVSGVPLRAL LDLHLSVAWR LWRHVAPADD PQDPVQSVVR AGEVMLRAID DAVAALTEGY
QLARRQVVAE QAAARREFVD DLLLGGAQAA VGLAERAGEF GLNLAGPHAV VVVRAQRPFV
ESSPLTSMLE RSLMGAKADA DALVTTKDDA LVVVFAAPDR AAVDQVVSAL TANLPAPEAE
AGVRLHRVAA VGAWRMGVGR AHPGPAGVGQ SYAEAIDALA LGQRLGLPEP VVDAADLLLY
RVLVRDEAAM RELVDAVLAP LVGARGGAEP LLQTLDAYFG AGGNATLAAR SLHLSVRALT
YRLAKIADLT GRDPVDPRHR LELQTALVGA RLLGMTGT
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