| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3441 |
|---|
| Symbol | |
|---|
| ID | 8449056 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 3782973 |
|---|
| End bp | 3783521 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645042517 |
|---|
| Product | histidine triad (HIT) protein |
|---|
| Protein accession | YP_003202757 |
|---|
| Protein GI | 258653601 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.000440827 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0000328621 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAGA CCGGCGGGCC CGAGCTGGTC GAGCAGGCCG GTGTCGGCGT GCCCGACCAG
CTCGCCCGGC TGTGGACGCC GCACCGGATG GCCTACGTCA GCGGCGGTTC CGGGGCGCCC
AAGCCGGCCG ACCCCGGCTG CCCGTTCTGC CACATCCCGT CGCTGTCCGA CGAGGACGGG
CTGATCGTGG ACCGCGGCGA GCGGGTGTAC GCGGTGCTGA ACCTGTACCC GTACAACCCG
GGCCACCTGA TGGTGGTGCC CTACCGGCAC ATCCCGGACT ACACCGACCT GGATCCGGCC
GAGCTGGCCG AGTTCAGCGA GTTCACCCGG CACGCCCTCA CGGTGATCCG GACGGTCAGC
GCCCCGCACG GCTTCAACAT CGGCATCAAC GCCGGCGCGG CCGGCGGGGC CGGCATCGCC
CCGCACCTGC ACCAGCACCT GGTGCCTCGG TGGGGCGGCG ACGCCAACTT CATGCCCGTC
ATCGGGCAGA CCAAGGTGCT GCCGCAGCTG CTGGCCGACA CCCGGGGCCT GCTCGCCGCA
GCCTGGTAA
|
|---|
| Protein sequence | MAETGGPELV EQAGVGVPDQ LARLWTPHRM AYVSGGSGAP KPADPGCPFC HIPSLSDEDG
LIVDRGERVY AVLNLYPYNP GHLMVVPYRH IPDYTDLDPA ELAEFSEFTR HALTVIRTVS
APHGFNIGIN AGAAGGAGIA PHLHQHLVPR WGGDANFMPV IGQTKVLPQL LADTRGLLAA
AW
|
|---|
| |