Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3415 |
Symbol | |
ID | 8449030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3753756 |
End bp | 3754694 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645042492 |
Product | pyridoxal biosynthesis lyase PdxS |
Protein accession | YP_003202732 |
Protein GI | 258653576 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.000340769 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000106883 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTCCGCCC CTTCTTCCCC CGACTTCGCC GCCGAGTCCA CCGCCGCCGA CTCGCTGACC GCCACCGGCA CGGCGCGGGT CAAGCGGGGC ATGGCCGAGA TGCTCAAGGG CGGCGTGATC ATGGACGTGG TCACCGCCGA GCAGGCCAAG ATCGCCGAGG ACGCCGGCGC GGTCGCGGTG ATGGCGCTGG AACGGGTGCC GGCCGACATC CGCGCGCAGG GCGGCGTCTC CCGGATGAGC GATCCGGACA TGATCGAGAG CATCATCTCC GCGGTGTCCA TTCCGGTGAT GGCCAAGGCC CGGATCGGGC ACTTCGTCGA GGCCCAGGTG CTGCAGTCGC TCGGCGTCGA CTACATCGAC GAGTCCGAGG TGCTCACCCC GGCCGACTAC CGCAACCACA TCGACAAGTG GGCCTTCACC GTGCCGTTCG TGTGCGGGGC GACCAACCTG GGCGAGGCGC TGCGCCGGAT CACCGAGGGC GCGGCGATGA TCCGCTCCAA GGGCGAGGCC GGCACCGGCG ACGTGTCCAA CGCGGTGACC CACATGCGCA CCATCGGCGG GCAGATCCGC CGGCTCACCT CGCTGTCCCC GGACGAGCTG TTCACCGAGG CCAAGGAGCT GCAGGCGCCC TACGACCTGG TCGCCGAGGT GGCCGCGGCC GGCAAGCTGC CGGTGGTCCT GTTCACCGCG GGCGGCATCG CCACCCCCGC CGACGCGGCC ATGATGATGC AGCTGGGCGC CGAGGGCGTG TTCGTCGGCT CGGGCATCTT CAAGTCCGGC AACCCGGCGG CCCGGGCCGA GGCCATCGTC AAGGCCACCA CGTTCTACGA CGACCCCGAC GTCATCGCCA AGGTCTCCCG CGGTCTGGGC GAGGCCATGG TCGGCATCAA CGTCGACGAC ATTCCCGTCC CGCACCGGCT GGCCGAACGC GGCTGGTAG
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Protein sequence | MSAPSSPDFA AESTAADSLT ATGTARVKRG MAEMLKGGVI MDVVTAEQAK IAEDAGAVAV MALERVPADI RAQGGVSRMS DPDMIESIIS AVSIPVMAKA RIGHFVEAQV LQSLGVDYID ESEVLTPADY RNHIDKWAFT VPFVCGATNL GEALRRITEG AAMIRSKGEA GTGDVSNAVT HMRTIGGQIR RLTSLSPDEL FTEAKELQAP YDLVAEVAAA GKLPVVLFTA GGIATPADAA MMMQLGAEGV FVGSGIFKSG NPAARAEAIV KATTFYDDPD VIAKVSRGLG EAMVGINVDD IPVPHRLAER GW
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