Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3398 |
Symbol | |
ID | 8449013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3736307 |
End bp | 3737074 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645042475 |
Product | protein of unknown function DUF28 |
Protein accession | YP_003202715 |
Protein GI | 258653559 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.00438869 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000218577 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGTGGCC ACTCCAAATG GGCGACGACC AAGCACCAGA AGGCGGCCAA GGACGCCAAG CGGGGCAAGC TGTTCGCCAA GCTGATCAAG AACATCGAGG TCGCGGCCCG CACCGGGGGC GGTGACCCGG ACGGCAACCC CACCCTCTAC GACGCGATCC AGAAGGCCAA GAAGTCCTCG GTCCCCAACG AGAACATCGA CCGTGCGCTC AAGCGGGGGT CCGGGGCCGA GGCCGGCGGG GTCGACTACC AGTCGATCAC CTACGAGGGC TACGGCCCCA ACGGCGTCGC GATCATGATC GAGTGCCTGA CCGACAACCG GAACCGGGCC GCCTCCGAGG TGCGGGTGGC GGTCACCCGC AACGGCGGCA CCATGGCCGA CCCGGGCAGC GTCTCGTACC TGTTCAGCCG CAAGGGCGTC GTGCTGGTGC CGCAGCAGTC CAACGGCTCG ACCGTCACCG AGGACGATTT GATGCTGGCC GTCCTGGACG CCGGGGCGGA GGAGATCAAC GACCTGGGCG AGACGTTCGA GGTCGTCTCC GAGGCCACCG ACCTGGTCGC CGTGCGGACC GCGGTGACCG AGGCCGGGCT GGAGTACGAC TCGGCCGACG CCACCTTCAT CGCCTCGGTC GACGTGCCCC TGGACGTGGA GGGCGCCCGC AAGGTGATCA AGCTGGTGGA CGCGATCGAG GACCTGGACG ACGTGCAGAA CGTCTACACC AATGCGGACA TCTCCGACGA GATCGCCGAG CAGCTCGACA ACGAGTAG
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Protein sequence | MSGHSKWATT KHQKAAKDAK RGKLFAKLIK NIEVAARTGG GDPDGNPTLY DAIQKAKKSS VPNENIDRAL KRGSGAEAGG VDYQSITYEG YGPNGVAIMI ECLTDNRNRA ASEVRVAVTR NGGTMADPGS VSYLFSRKGV VLVPQQSNGS TVTEDDLMLA VLDAGAEEIN DLGETFEVVS EATDLVAVRT AVTEAGLEYD SADATFIASV DVPLDVEGAR KVIKLVDAIE DLDDVQNVYT NADISDEIAE QLDNE
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