| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3380 |
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| Symbol | |
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| ID | 8448995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3718751 |
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| End bp | 3721219 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 645042457 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_003202697 |
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| Protein GI | 258653541 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000200325 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00033219 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCCGG ACGCCGACAG CCGCACGACG CAGGCCGTCG TCCCGAGCAC CGGGGTGCCC
GACGCCGGAT CTGCGCACAC CGGCGCCACC GGTGAGGCCG CCGCCCGCCC CCTGGCCACC
CTGACCGAGC CGCTCACGCC GGCCCGCCCG CCGGCCGGCG CCGCCGTCGT CGGCACCGTG
CCGGCCGAGG CCGATCTCGC CCCCGAGGTA CCGATTCCTT CGGCCACCCG ACGGGTCCGG
GCCCGCATCG CCCGCCGGAT GAGCGGGCAG CGGCCGACCG CGTCGCCCAC CCGCACCGTG
CTTGAGCCGC TGTTCGCGGT GCACCGCAGC CTGCATCCCA AGGCCGACCT GAAGGAGTTG
CAGCGGGCCT ACGAGGTCGC CGAGCAGGCC CACGCCGGCC AGTTCCGCCG CTCCGGGGAC
CCGTACATCA CCCACCCGCT GGCGGTCGCC ACCATCCTGG CCGACCTGGG CATGGACACC
ACCACGCTGG TCGCCGCCCT GCTGCACGAC ACGGTGGAGG ACACCGAATA CACCCTGGAG
AAGGTCACCG CCGACTTCGG CGACGAGGTC GCGCACCTGG TCGACGGGGT CACCAAGCTG
GACAAGGTCC GCTTCGGCGA CGCGACCGAG GCCGAGACCA TCCGCAAGAT GATCATCGCG
ATGGCCGAGG ACCCGCGGGT GCTGGTGGTC AAGCTGGCCG ACCGGCTGCA CAACATGCGC
ACCATGCGGT TCCTGCCGCC GGACAAGCAG GCCCGCAAGG CCCGCGAGAC CCTGGAGGTG
CTGGCGCCGC TGGCCCACCG GCTGGGCATG GCGACCATCA AGTGGGAGCT GGAGGACCTG
GCGTTCTCCA TCCTGCATTC CAAGCGCTAC GACGAGATCG TGCGGCTGGT GGCCGACCGG
GCCCCGTCCC GGGACACCTA CCTGGCGGCG GTCACCCAGC AGTTGGAGGC CGAGCTCACC
GCCGCGAAGA TCCCCGGCCA GGTGGTCGGC CGGGGCAAGC ACTACTACTC GATCTACCAG
AAGATGAAGG CCCGCGGCCG CGAGTTCGAC GAGATCCACG ACCTGGTCGC GGTCCGCATC
CTGGTCGGCA GCGTGCGCGA GTGTTACGCG GCGATGGGCG TGGTGCACGC GCTGTGGGCG
CCGATGCCGG GCCGGTTCAA GGACTACATC GCCCAGCCCC GGTACGGGGT GTACCAGTCG
CTGCACACCA CGGTGATCGG GCCCGAGGGC AAGCCGCTGG AAGTGCAGAT CCGCACCTTC
GACATGCACC ACACCGCCGA GTACGGCATC GCCGCGCACT GGCGCTACAA GGAGACCCGG
GGCACCCACG CCGGGGCCAG CGCGACCGTC GACGAGATGG CCTGGATGCG GCAGCTGCTG
GACTGGCAGC GGGAGACCGG CGACGCCGGC GAGTTCCTGG ACAACCTGCG CTACGAGATG
GCGCACAGCG AGATCTTCGT CTTCACCCCC AAGGGCGACA TCCACACGCT GCCGGTCGGT
TCGACGCCGG TCGACTTCGC CTACTCGGTG CACACCGAGG TCGGGCACCG ATGTATCGGC
GCCAAGGTGG ACGGCCGGCT GGTTCCGCTG GAGCGGCGGC TGTCCAACGG GCAGTTCGTG
GAGATCTTCA CCTCCAAGGC GCCCAACCAG GGCCCGAGCC GGGACTGGCT CTCGTTCGTC
GCCTCGTCCC GGGCCAAGAG CAAGATCCGG CAGTACTTCG CCAAGTCCCG CCGCGAGGAG
GCGGTCGAAC TCGGCAAGGA AGCCCTGGCC AAGGCGGCCC GCCGGGCCGG CCTGCCGGTG
CAGCGGCTGG TCACCCATGA CGCGCTGGCC GTCGTCGGGC ACGAGCTCGG CTACAAGGAC
ATCGCCAGCC TGTACGCCGC GGTGGGGGAG AACCACGTCG CCGCCTCCAC GTTGGTGGCC
AAGGTGGTCT CCTACGTCGG CGGCGAGGAG GACGCGGTCG ACGAGGTCAC CGACCGCTCG
GTGCCGTCGG TCACCCGGCG CCGGCACCGC GCCACCGGCG ACGGCGGGGT GCTGGTCAAG
GGCATCTCCG ACATCCAGGT CAAGCTCGCC CGCTGCTGCA CCCCGGTGCC GGGCGATGAG
ATCCTCGGCT TCATCACCAA GGGCGGGGCG GTCTCGGTCC ACCGGATCGA CTGCACCAAC
GCCTCGGCGC TGCAGAAGGA ACAGGCCCGG CTGGTCGAGG TCAGCTGGGA CCCCAGCTCG
GCCACGGTGT TCCTGGTGAC CATCCAGGTC GAGGCGCTGG ACCGGGCCCG GCTGCTCTCG
GACATCACCA AGACCCTGGC CGACCTCAAG GTCAACATCC TGTCGGCCAA CCTGTCGATG
TCCAAGGACG GGATGGCCAT CTCCCGGTTC TCCTTCGAGA TGGCCGACCC GACGCACCTG
GGGCACCTGG TGCACGCGGT CAAGAACGTG GACGGCGTGT ACGACGTGTA CCGGGTGACC
AGCGCCTGA
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| Protein sequence | MSPDADSRTT QAVVPSTGVP DAGSAHTGAT GEAAARPLAT LTEPLTPARP PAGAAVVGTV
PAEADLAPEV PIPSATRRVR ARIARRMSGQ RPTASPTRTV LEPLFAVHRS LHPKADLKEL
QRAYEVAEQA HAGQFRRSGD PYITHPLAVA TILADLGMDT TTLVAALLHD TVEDTEYTLE
KVTADFGDEV AHLVDGVTKL DKVRFGDATE AETIRKMIIA MAEDPRVLVV KLADRLHNMR
TMRFLPPDKQ ARKARETLEV LAPLAHRLGM ATIKWELEDL AFSILHSKRY DEIVRLVADR
APSRDTYLAA VTQQLEAELT AAKIPGQVVG RGKHYYSIYQ KMKARGREFD EIHDLVAVRI
LVGSVRECYA AMGVVHALWA PMPGRFKDYI AQPRYGVYQS LHTTVIGPEG KPLEVQIRTF
DMHHTAEYGI AAHWRYKETR GTHAGASATV DEMAWMRQLL DWQRETGDAG EFLDNLRYEM
AHSEIFVFTP KGDIHTLPVG STPVDFAYSV HTEVGHRCIG AKVDGRLVPL ERRLSNGQFV
EIFTSKAPNQ GPSRDWLSFV ASSRAKSKIR QYFAKSRREE AVELGKEALA KAARRAGLPV
QRLVTHDALA VVGHELGYKD IASLYAAVGE NHVAASTLVA KVVSYVGGEE DAVDEVTDRS
VPSVTRRRHR ATGDGGVLVK GISDIQVKLA RCCTPVPGDE ILGFITKGGA VSVHRIDCTN
ASALQKEQAR LVEVSWDPSS ATVFLVTIQV EALDRARLLS DITKTLADLK VNILSANLSM
SKDGMAISRF SFEMADPTHL GHLVHAVKNV DGVYDVYRVT SA
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