| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3342 |
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| Symbol | |
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| ID | 8448957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 3678564 |
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| End bp | 3680387 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 645042419 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003202659 |
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| Protein GI | 258653503 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0000502308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0262189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGC AGGCTGCCCT CCTTTCCGAT ACCCCTGATT CTGAATCGAT CCAGGAGACC
GCTCCGGTAC CCACCGGGCC CGGTTTCGAC GAGCTGGGTC TGCCCGGCAC GCTGCTGCGC
GCCGTCAAGG ACCTGGGCTT CGCCACCCCC ACCGCAATCC AGGCGGCGGC CATCCCGGCG
CTGCTCGCCG GCCGGGACAT CACCGGTGTC GCGCAGACCG GCACCGGCAA GACGGCCGCC
TTCGGCCTGC CGCTGCTGGC CGCGATCGAT CCGACCCCCG GCGTGCAGGC CCTGGTCCTG
TGCCCGACGC GTGAGCTCGC CGTCCAGGTG GCCGACGCCA TCTCCTCGTT CGCGACCGCG
CTGCCCGACG TGTCGGTGAT CGCCATCTAC GGCGGCACCG GCTTCCTGCC CCAGCGGGCC
GCGCTGCGGG CCGGCGCCCA GGTCGTCGTC GGCACTCCCG GACGGATCAT CGACCACCTC
GAGCGGGGCA CCCTGGACCT GTCCGGGCTG CGCTTCCTGG TGCTCGACGA GGCCGACGAG
ATGCTGCGGA TGGGCTTCGC CGAGGACGTG GATCGCATCC TGTCCGACGC CCCGAACTCC
CGTCAGGCCG CCTTGTTCTC GGCCACCATG CCGCCGGCGA TCCGGTCGAT CGCGGCCAAG
CACATGACCA ACCCGGTGGA TATCGCCGTG AGCCGGCAGT CCTCGACTGT CGACTCGGTC
CGGCAGATCT ACGCGGTCGT GCCGTTCCGC GACAAGGTCG ACGCGCTGAC CCGCTTCCTG
CAGGTCACCG AGGGCGATGC GGCGATCGTG TTCGTCCGCA CCAAGGAGGC CTGCGACCAG
GTCGGCACCG ACCTGCTCGC CCGCGGCGTC TCGGCCGCGG TGATGAACGG CGACGTCCCG
CAGAAGGAGC GCGAGAAGAT CATCGAGCGG CTCCGCGACG GGCGCCTGGA CGTGCTGGTG
GCCACCGACG TCGCCGCCCG CGGCCTGGAT GTCGACCGGA TCGACCTGGT GGTCAACTTC
GACGCCCCCG GCGAGCCGGA GGCCTACGTC CACCGCATCG GCCGCACCGG CCGGGCCGGC
CGCACCGGTA CCGCGCTGAC GTTCTTCACC CCTCGGGAGA TGGGCCGGCT GCGGGCCATC
GAACGGGCCA CCCGCGGCAC CCTGGAGCAG ATCGTCCCGC CCAGCCCGGA CGAGGTGACC
GCGCACAAGG CGGCCATGGT GCTGCGCAAG GCTCTGACCC GTCTGGACGT GGGCCGGTTG
GGCCGGCAGA ACCGGCTGAT CCGCGACCTG CTCGCGGAGT CCGAGATCAC CGCCGAGGAA
CTGGCCGCCG CGCTGCTGGC GCTGGCCGCC GGCGACGACG GCGTCGAGCG GACCCCGGCC
GTGGAGCCGG CGTCGTTCGA GAAGGACCGC AAGACCAAGG TGCGCTCAGC CGCCGGTGAC
CGGCCCGGCC GCGCGGCCCG CCCGCCGTTC GGTCGGCGCT ACCGCGTCGC CGTCGGTCAT
CGGGACGGGG TGCGCCCGGC CGGCATCGTC GGCGCCATCG CCGGCGAGGG TGGGGTCAGC
GGCAAGGATC TGGGCCGCAT CGAGATCTTC GACACCTTCT CCACGGTCGA GATCGCCGCG
GAGCTGTCCC CGGCCGCGCT CGGCCGGATC GCCAACGCCA AGGTCAGCGG CCGCACCCTG
CGGATCGAGC CCGACCGCGA GGACGCGGCC GGTCGCCGGC CCTGGGCCGG ACAGCGCGAT
TCGCACGGTC CGCGCCGGGA CGGCCAGGGC TTCGAGCACG GCCACGATCA CCGTCCGGTC
CGGGCCGGAC GCGGCGGTCG CTAA
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| Protein sequence | MTMQAALLSD TPDSESIQET APVPTGPGFD ELGLPGTLLR AVKDLGFATP TAIQAAAIPA
LLAGRDITGV AQTGTGKTAA FGLPLLAAID PTPGVQALVL CPTRELAVQV ADAISSFATA
LPDVSVIAIY GGTGFLPQRA ALRAGAQVVV GTPGRIIDHL ERGTLDLSGL RFLVLDEADE
MLRMGFAEDV DRILSDAPNS RQAALFSATM PPAIRSIAAK HMTNPVDIAV SRQSSTVDSV
RQIYAVVPFR DKVDALTRFL QVTEGDAAIV FVRTKEACDQ VGTDLLARGV SAAVMNGDVP
QKEREKIIER LRDGRLDVLV ATDVAARGLD VDRIDLVVNF DAPGEPEAYV HRIGRTGRAG
RTGTALTFFT PREMGRLRAI ERATRGTLEQ IVPPSPDEVT AHKAAMVLRK ALTRLDVGRL
GRQNRLIRDL LAESEITAEE LAAALLALAA GDDGVERTPA VEPASFEKDR KTKVRSAAGD
RPGRAARPPF GRRYRVAVGH RDGVRPAGIV GAIAGEGGVS GKDLGRIEIF DTFSTVEIAA
ELSPAALGRI ANAKVSGRTL RIEPDREDAA GRRPWAGQRD SHGPRRDGQG FEHGHDHRPV
RAGRGGR
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