Gene Namu_3237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3237 
Symbol 
ID8448851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3566147 
End bp3567289 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content75% 
IMG OID645042316 
ProductNLP/P60 protein 
Protein accessionYP_003202557 
Protein GI258653401 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00058739 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000426733 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTGTCCG CGAGCCTGAT GTGGACCGGT TCGGCTCTGG CCGATCCGGA GAACCCGGCC 
ACCGCCGACG AAGCCCAACG CGCCTACCTG GACAGTTCCC ACCGCGCCGG GGTACTCAAC
GAAGAAGTTC TGGTCGCGCA GGAAAAGCAG GACGCGGCCA ACGCGGCCGC GGCTGCCGCG
GGCGACCAGG TCACGGCCGC CGGTGTGGCC GCCGAAGCCG CGCGCGCCCA GGCCGAGCAG
GCCGATGCGG CCGCCGCCAG CTACCAGGGC AAGGTCAACG CCTTCGCCAA CGCCAGCTTC
CGGGGCGCCC GGTTGGACGG CATGTCCGTC CTGCTGACCG CCGGCTCGGC CGAGGACTTC
CTGGACCAGG CGACCTCGCT GGACCGGGTC GCCGCCGATA CGCAGCAGAC CCTGGACGAG
GCCATCGCCG CCCGCGATGC CGCCACCCAG GCCAAGGCGC AGGCTGACGC CGCCGCGGCC
GCCGCGGCGC AGGCCAAGGC CGACGCCGAC GCCGCGGCCG CCGCCGCCGC GCAGGCGACC
GCCGACGTGA CCTCCCGCAA GGCCGATCTG GATGCCGAGG CCGCCCGGTA CAAGGCGCTG
TACGACTCCC TGTCCGAGCA GGAGCGGCAG GCCGCCGCTG CCGCCGAGGA GCAGGCCAAC
GCCGCGGCCA ATGCCGCCGC CGAGCCAGCC GCGGCGCCGC AGGCCGCAAG CCGGTCCGAT
CGCAGCACCA CCAGCGACTC GTCCGCCGCG ACCAGCTCGG CCGCGGCGGC CGCCAGCGCG
CCGGCCGGCA GCGGAGCCGC GGCGGCCGCG GTCGCCGCCG CTCTGTCCAA GGTCGGCTCG
CCCTACGTCT ACGGCGCTGC CGGCCCGAAC GCCTTCGACT GCTCGGGTCT GACCTCGTGG
GCGTGGGCCC AGGCCGGCGT CAGCATCCCG CGGACCTCCG GCGGCCAGGC CGGCCTGCCG
TCGGTCCCGC TGAGCGAGCT GCAGCCCGGT GACCTGGTCA CCTACTACTC GCCGGTCTCG
CACGTGGCCA TGTACATCGG CAACGGCCAG GTCGTGCACG CCTCCACCGA GACCCGTCCG
GTGTACGTCA CCACGGTCAG CGGGGCCGGC CCGAACGCGA CCGGGCATCG CGTCACCGGC
TGA
 
Protein sequence
MLSASLMWTG SALADPENPA TADEAQRAYL DSSHRAGVLN EEVLVAQEKQ DAANAAAAAA 
GDQVTAAGVA AEAARAQAEQ ADAAAASYQG KVNAFANASF RGARLDGMSV LLTAGSAEDF
LDQATSLDRV AADTQQTLDE AIAARDAATQ AKAQADAAAA AAAQAKADAD AAAAAAAQAT
ADVTSRKADL DAEAARYKAL YDSLSEQERQ AAAAAEEQAN AAANAAAEPA AAPQAASRSD
RSTTSDSSAA TSSAAAAASA PAGSGAAAAA VAAALSKVGS PYVYGAAGPN AFDCSGLTSW
AWAQAGVSIP RTSGGQAGLP SVPLSELQPG DLVTYYSPVS HVAMYIGNGQ VVHASTETRP
VYVTTVSGAG PNATGHRVTG