Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3143 |
Symbol | |
ID | 8448757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3460104 |
End bp | 3461651 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645042224 |
Product | signal recognition particle protein |
Protein accession | YP_003202465 |
Protein GI | 258653309 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00382292 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0900367 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCGAAA CGCTGTCTGA CCGGCTGTCC GGTGTCTTCA CCAATCTGCG CGGCAAGGGT CGGCTGACCC CGGCCGACGT CGACCGCACG TGCCGGGAGA TCCGGGTCGC GCTGCTGGAG GCCGACGTTG CGCTCCCGGT GGTCCGTGCG TTCATCGCGC GGATCAAGGA GCGGGCCAAC GGGGTGATCG TCTCGGCGGC CCTGAACCCG GCGCAGCAGA TCATCAAAAT CGTCAACGAG GAACTCGTCG CGATCCTCGG CGGCGAGACT CGGCGGCTGA CCTACGCCAA GAATCCGCCG ACGGTGATCA TGCTGGCCGG CCTGCAGGGC GCCGGCAAGA CCACCCTGGC CGGCAAGCTC GCGCTCTGGC TCAAGGGGCA GGGGCACACC CCGCTGCTGG TCGCCTCCGA CCTGCAGCGC CCCAACGCGG TCACCCAGCT GCAGATCGTC GGCGAGCAGG CCGGCGTGCA GGTCTTCGCG CCCGAGCCCG GCAACGGGGT GGGCGACCCG GTCGCGGTGG CCCGGGCCGG TGTCGCCCAC GCCAAGGTGC GGCTGCACGA CATCGTCATC GTGGACACCG CCGGCCGGCT GGGCGTGGAC GCCGACATGA TGCAGCAGGC CGTGGACATC CGCGACGCCG TCCAGCCGCA GGAGATCCTG TTCGTGCTCG ACGCGATGGT CGGCCAGGAC GCGGTCACCA CCGCGGAGGC CTTCCGCGAC GGCGTCGGCT TCAACGGCGT GGTGCTGACC AAGCTCGACG GCGACGCCCG CGGTGGTGCC GCGCTGTCCG TGCGGCACGT CACCGGGCAG CCGATCATGT TCGCCTCCAC CGGCGAGAAG CTGGCCGATT TCGACGTCTT CCACCCGGAC CGGATGGCCT CCCGGATCCT GGGCATGGGC GACATGCTGA CCCTGATCGA GCAGGCCGAG CAGCACTTCG AGGCCGACCA GGCCGAGGCG ATGGCCGCCA AGATGGCGGG CAACGAGTTC ACCCTCGAGG ACTTCCTCGA GCAGATGATG ATGATCCGCA AGATGGGCCC CATCGGCGGG CTGCTGGGCA TGCTGCCCGG GGCCGGCCAG ATGAAGGACG CCCTGGCCAA CGTCGACGAC CGCGACATCG ACCGCACCGC GGCCATCATC CAGTCCATGA CGCCGGCCGA GCGGCAGGAC CCGAAGATCA TCAACGCCTC CCGCCGGCAG CGCATCGCCC GGGGCTCGGG CTCGACCGTG TCCCAGGTCA ACGCGCTGGT GGAACGCTTC TTCGAGGCGC GCAAGATGAT GTCCTCAATG GCCGGCCGGT TCGGCTTCCC GGGCGCCCGC CCGTCCAACC GCAAGGCGGC CAAGGGCCGG CGCAAGTCGG GCAAGCGCAC GACCGGCCGC GGCCCGACCC AGCCCAAGGT CAAGGGCATG CCGGGCGGTT TCCCCGGGAT GGGCGCCCTG CCGCCGGGAA TGGGCGCGCC GGGGATGGGG GCACCCGGCG CGATGCCGGG GCTGGATCAG TTCCCCGGTG ACTTCGATCC GACGAAGCTC AAGTTCCCCA AGCAGTGA
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Protein sequence | MFETLSDRLS GVFTNLRGKG RLTPADVDRT CREIRVALLE ADVALPVVRA FIARIKERAN GVIVSAALNP AQQIIKIVNE ELVAILGGET RRLTYAKNPP TVIMLAGLQG AGKTTLAGKL ALWLKGQGHT PLLVASDLQR PNAVTQLQIV GEQAGVQVFA PEPGNGVGDP VAVARAGVAH AKVRLHDIVI VDTAGRLGVD ADMMQQAVDI RDAVQPQEIL FVLDAMVGQD AVTTAEAFRD GVGFNGVVLT KLDGDARGGA ALSVRHVTGQ PIMFASTGEK LADFDVFHPD RMASRILGMG DMLTLIEQAE QHFEADQAEA MAAKMAGNEF TLEDFLEQMM MIRKMGPIGG LLGMLPGAGQ MKDALANVDD RDIDRTAAII QSMTPAERQD PKIINASRRQ RIARGSGSTV SQVNALVERF FEARKMMSSM AGRFGFPGAR PSNRKAAKGR RKSGKRTTGR GPTQPKVKGM PGGFPGMGAL PPGMGAPGMG APGAMPGLDQ FPGDFDPTKL KFPKQ
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