Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3087 |
Symbol | |
ID | 8448701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3401536 |
End bp | 3402786 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 645042169 |
Product | hypothetical protein |
Protein accession | YP_003202410 |
Protein GI | 258653254 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.000449393 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000364534 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGGCCTACC GCTTCGACCC GGACGACGTC CGGTACCTGA CCGGGCCGGC CGGGGCCGAC GCCCTGGCCG TGGCCCAGGC GCTGCCGTTG ACCGAGGACA GCCTGCTGGC CGACCTGGGC CGGGTCCGCG CGGTGGCCGC GACCCGGGCG GGCGCCGTGG TGGAGACCGT GCGGTTGCGC CGGCGGGCGG TGGGCAAGCT CGGCCCGGCC GCGGCCGGCT GGCTGTTCAC CGACGAGGCG CTGCAGCAGG CCACCCCGGA GCCGGTGGCC CGGCACCGGG CCCGGCGGCT GGCCGGGCTC GGCGTGCACG ACCTGACCTG CTCGATCGGG GCCGATCTGG CCGCGCTGGC GGCCGGTGCC GCTCGAGGCG GGCCGGTCAC GGTCGGCTCC GACCTGGACC CGGTCCGGGT GCTAATGGCC CGGCACAACG TGGCCGCGGT GGGCCTGCCG CCTCGGGTGC TGGTGGCCGA CGCGCTCACC CGCACCACCC GCGGCCTGCT CGGCTACGCC GACCCGGCCC GCCGGGACGG GGGCCGGCGC ATCACCTCCA CGTCCACCGT GCCGGCCGTG GACGAGCTCG ACGCCGCCCA CGCCGACCGG CCCCCGGTGC TGCGGGTGCC GCCGGGCCTG GACTACGACG CCCTGGCCCG GCCGGGGGAG GTGGAGCTGG TCAGCCTGGA CGGGGTCGCC CGCGAGGCCG TGCTGTGGCC GCCGGAGCTG GCCGGCCCGG CCCGGCGGGC CACCGTCCTC AGCTCCACCG TGCTCAGCTC CACCGTGCTC AGTTCCGCCG GGGACGGCTG GACGGTGACC AGCGACGAAC CCGACGACGT CCCGGTCGGT CCGATCGGGG AGTTTCTCAT CGATCCGGAT CCGGCGGTGG TCCGCGCGCA CCTGGTGCGC CAGTACGCGG CCCGGCACGG CCTCGGGCAG TTGGACCCGC ACCTGGCCTA CCTGACCGGC CCGGCCGTGC CGGCCGGCGT CCGCGGCTTC CGGATCCTGG ACCGGGCGCC GTACGCGGAG AAGACCGTGG CCCGCTGGAT CCGCCGGGAC GGCGTGGGCA CCCTGGAGAT CAAGCAGCGC GGCACCCCGA TCGTGCCCGA CGAGCTGCGC CGCCGGCTGC GGTCGGCGCT GACCGGGCCG ACCCGGGAGG CGGCCACCCT GGTGGTGGCC CGGGTCGGCC GGCGGGCCGA GGCGTTCTGG TGCCGGGCGA CCCAGCCGTC CCCGGCCGGC GGGCCGGCCG GCGGCCCGTA A
|
Protein sequence | MAYRFDPDDV RYLTGPAGAD ALAVAQALPL TEDSLLADLG RVRAVAATRA GAVVETVRLR RRAVGKLGPA AAGWLFTDEA LQQATPEPVA RHRARRLAGL GVHDLTCSIG ADLAALAAGA ARGGPVTVGS DLDPVRVLMA RHNVAAVGLP PRVLVADALT RTTRGLLGYA DPARRDGGRR ITSTSTVPAV DELDAAHADR PPVLRVPPGL DYDALARPGE VELVSLDGVA REAVLWPPEL AGPARRATVL SSTVLSSTVL SSAGDGWTVT SDEPDDVPVG PIGEFLIDPD PAVVRAHLVR QYAARHGLGQ LDPHLAYLTG PAVPAGVRGF RILDRAPYAE KTVARWIRRD GVGTLEIKQR GTPIVPDELR RRLRSALTGP TREAATLVVA RVGRRAEAFW CRATQPSPAG GPAGGP
|
| |