| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2911 |
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| Symbol | |
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| ID | 8448524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3183954 |
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| End bp | 3186611 |
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| Gene Length | 2658 bp |
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| Protein Length | 885 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 645041997 |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003202239 |
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| Protein GI | 258653083 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00504446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000384659 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTCGTGG TCGAGATCGC CGCCCTCGGG CCGTTGGAGA TCCGCGGGCA AGCGGCCACC
CTGAGCCCAC GAGATCGCAC GGTGCTGTGC GCGCTTGCCC TGACCGCCGG CCACGTGATG
TCCGCCGAGC GACTGGCCGA CGCCTTGTGG GGCGAATCGG CACCTCCCTC CTGGCACAAG
GTCGTGCCCG GCTGCGTGAT GCGGCTGCGT CGGCTGCTGG GAACCGAGGC GATCGAGACC
ATGACGCCTG GCTACCGGCT CACGGTGGTG CCCGAGGACA TCGACCTCTT CCGCTTCGAA
CGTCTGCTGG GCCGGGGTCG CGAACTGCTG CTCCTGGGTG AACCGGAGCG GGCCGGGTAC
GCCCTGGACG AGGCGCTGGG ACTGTGGCGT GGTGCGCCGC TGAGCGACCT GGGCGACTGG
GAACCCGGTC GGATCGAAGC CGACCGCCTC GACGAGTTGC ATCTTCAGGC GCAGGAGTGC
CGTATCGAGG CGGCCCTGCG GTCCGGACGG GCCGTCGAGA TGATCGCCGA CGCGCACCGC
CGGGTGGCCG AGGCCCCGTT GCGGGAGCGC CGCTGGGCCC TGCTCGCTCA GGCCCAGTAC
CAGGCCGGTC AACAGGCGCA GGCGCTGCGC ACGCTCCGTC GCGCACGGTC GGTGCTGGCC
AGCGAGCTGG GGCTGGACCC GGGAGCCGAT CTGCTGGCGT TGGAGGCGGC GATCCTGCGC
CAGGACCCGG CGCTGGACAT CCGGTCGGCG GACGTCACCG CGGCGGCGGA CTGTCCCTGG
CCGGGTCTGG TGCCGTACGG GATCTCCGAC GTCGATTCGT TCTTCGGCCG GGACAGGGAG
ATCACCGAGT GTCTGGACCG GCTGGCCACG ACCAGGATTC TGGTGATCAC CGGACCGTCC
GGCTCGGGCA AGTCGTCGCT GGTTCGCGCC GGGCTGGCGG CCCGCTTCGC CCGCGGCGGT
CATCCGGTGG TCATCACTCC GGGCGCGGAC CCGCTGGCCG CGGTCGGCCC CGAACCACTG
CCGGCCGGGG AACTCCTGGT CGTCGACCAG GCCGAGGAAC TGTTCACGCT CACCACCGAC
CCCGACGCTC GGTCGCAATT CCTTGCCCGT TTGATTCGCC ACCACGACCG GGGTCCGCTG
GTGATGGTGC TGCGCGCCGA CCGTGTCGGC GACCTGGCCG CCTTCCCCGA TTTCGCCCGG
CTGGCCGAGC GCGAGCTGTA CCTGCTCGGG CCGCTGACCG ACGCCGGGTT GCGCGCGGCG
ATCGAAGGTC CGGCCCGGCA GGCCGGCCTG CTGCTGGAAC CCGGGCTGGT CGATCTGCTG
GTCCGCGACG TGGAAGGGGA ACCCGGCGCG CTGCCGTTGC TCTCCCACGT CCTGCAACGC
ACCTGGCAGA GCCGGGAGGG CCGCATCCTC ACGGTCGCCG GCTACCGGGC CAGCGGCGGG
ATCCGGGGTT CGGTGGCCCA GGCCGCCGAG CAGCTGTACC AATCGCTCGC GCCCACCCAG
CAGGGGCAGC TCCGGCACTT GCTCCTACGG CTGGTCAGCA CGACCGACGA CAATGACGCG
GTCCGGATCC GCGTGCCGCG GCCCATGCTG GCCGGCGATC GGGATCGCGA GCGGTTGCTC
GAGGTACTCA CGGATGCGCG CCTGGTCACC ATCGATCGGG ACAGCGTGGA GCTGTCCCAC
GAATGCCTGG CCCGGGTCTG GCCTCGACTG CGGGGTTGGC TCGACGACGA CGTCGAAGGC
CGCCGCATCC TGCGGCATCT GGCCGGCGCC GCCCAGACCT GGGACGGGAT GGGCCGGGTG
GACAGCGAGT TGTATCGCGG GGTCCGGCTG TCGCAGGCTC TGGCCTGGGC CGAGAACAAC
GACCCCGACC TGACCGCCAC CGAGCGGGAC TTCCTCGCGG CCGCCGGAAG GGCCCGGGAG
GCCGACATCC GCGCCGCCGA GCAGGCGGCC CACGCCCGCG CTCGCAACCG CCGCCGCGGC
CGGCTGATCG CCGGCGCGAC CACCGCACTG CTCGTCGTCG CGCTGGTCGC GGCCTTCGTC
GCCGTGCGGC AACAACAGGC CCGGGACGCC GCCGACCTGG CCGCCTTGAT CTCGGACGCC
AACCGGGTGG ACGACGCGTC GCGATCCGCC ACCGGCCTGG ATCAGGCCCT GCTCTACGCG
GTCCAGGCGG TGCGTGTCCA CGACGCCCCA GAGACGCGCA ACACCCTGCT GGCTCTGTTG
AGCCAGCACC CGGACCTGAT CCGGTCGGTG CGAACCGGGC CGGTGCAATC CCTGGAAACT
ACCCCGGACG GGACTGGCAT CGTTGTCGGT ACCGACACCA GCACCGACGT GTATGACGTG
GCCGGAGACC GGTTGGACCA CTACCACCAT CTGGCCGCCG GGAGCTCGGC CGCCGAGGTC
AGCCCGGACA ACCGGAAGAT CGTCCTGGTC GCCAGCTCGT CCTCCGGCTT CGCCGAGGCC
AGTGCCGCGC TCAGCGCCAA GGTGGTGGAC GCCGCGACCG GCGCCGACGA GCCACTCACC
CTGCCCGGGG TCGCCGGGCA CTGGGTCTAC GGGGCCGATG TCAGCTACAG CGGCGACGGG
CGCCGGCTGG CCGCCTATGC CGGGTCTTCG GACTTGATAG GGCTCCGGGC CTCCGACCTG
CGGCGGCGTG TCGGGTGA
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| Protein sequence | MVVVEIAALG PLEIRGQAAT LSPRDRTVLC ALALTAGHVM SAERLADALW GESAPPSWHK
VVPGCVMRLR RLLGTEAIET MTPGYRLTVV PEDIDLFRFE RLLGRGRELL LLGEPERAGY
ALDEALGLWR GAPLSDLGDW EPGRIEADRL DELHLQAQEC RIEAALRSGR AVEMIADAHR
RVAEAPLRER RWALLAQAQY QAGQQAQALR TLRRARSVLA SELGLDPGAD LLALEAAILR
QDPALDIRSA DVTAAADCPW PGLVPYGISD VDSFFGRDRE ITECLDRLAT TRILVITGPS
GSGKSSLVRA GLAARFARGG HPVVITPGAD PLAAVGPEPL PAGELLVVDQ AEELFTLTTD
PDARSQFLAR LIRHHDRGPL VMVLRADRVG DLAAFPDFAR LAERELYLLG PLTDAGLRAA
IEGPARQAGL LLEPGLVDLL VRDVEGEPGA LPLLSHVLQR TWQSREGRIL TVAGYRASGG
IRGSVAQAAE QLYQSLAPTQ QGQLRHLLLR LVSTTDDNDA VRIRVPRPML AGDRDRERLL
EVLTDARLVT IDRDSVELSH ECLARVWPRL RGWLDDDVEG RRILRHLAGA AQTWDGMGRV
DSELYRGVRL SQALAWAENN DPDLTATERD FLAAAGRARE ADIRAAEQAA HARARNRRRG
RLIAGATTAL LVVALVAAFV AVRQQQARDA ADLAALISDA NRVDDASRSA TGLDQALLYA
VQAVRVHDAP ETRNTLLALL SQHPDLIRSV RTGPVQSLET TPDGTGIVVG TDTSTDVYDV
AGDRLDHYHH LAAGSSAAEV SPDNRKIVLV ASSSSGFAEA SAALSAKVVD AATGADEPLT
LPGVAGHWVY GADVSYSGDG RRLAAYAGSS DLIGLRASDL RRRVG
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