Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2899 |
Symbol | |
ID | 8448512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3169834 |
End bp | 3172224 |
Gene Length | 2391 bp |
Protein Length | 796 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645041985 |
Product | ABC transporter related |
Protein accession | YP_003202227 |
Protein GI | 258653071 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0178] Excinuclease ATPase subunit |
TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000977115 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000331786 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCACCG CCACCACCAC AGGGACCTCG CCGGCCGATC CGCCCGCCGC GGACCGGCAC GACATGATCC GTGTGCACGG TGCTCGGGTG AACAATCTCA AGGACATCAG CGTCGAGATC CCCAAGCGCC GGCTGACCGT GTTCACCGGG GTCTCCGGGT CGGGCAAGAG CTCGCTGGTC TTCGGCACCA TCGCGGCCGA GTCCCAGCGG CTGATCAACG AGACCTACAG CGCCTTCGTG CAGGGCTTCA TGCCTACGCT GGCCCGGCCG GACGTCGATG TGCTCGACGG GCTGACCACC GCGATCATCG TCGACCAGGA GCGGATGGGC GCCAACCCTC GTTCCACCGT GGGCACCGCG ACCGACGCCA ACGCGATGCT GCGGATCCTG TTCAGCCGCC TGGGCCAGCC GCACATCGGC TCACCGCAAG CCTTTTCGTT CAACGTGGCC TCGATCAGCG GCGCCGGCGC GGTGACCTTC GAACGGGCCG GGCAGACGAC CAAGGAACGC CGCGAGTTCT CCATCACCGG CGGGATGTGC CCGCGCTGCG AAGGCATTGG CCGGGTCAAC GATTTCGACC TGACCGCCCT GTACGACGAG AACAAGTCGC TCAATGAGGG CGCCCTGATC ATCCCCGGCT ACAGCATGGA CGGCTGGTTC GGCCGGATCT TCCGTGGCTG CGGCTACTTC GATCCGGACA AGCCGATTCG CCGCTTCACC AAGAAGGAAA TGCACGACCT GCTCTACCGG GAGCCGACCA AGATCAAGGT CGAGGGCATC AACCTGACCT ACGAGGGTTT GATCCCTAAG ATCCAGAAGT CCATGCTGTC CAAGGATGTC GAGGCGATGC AGCCGCACAT CCGGGCGTTC GTGGAGCGGG TGGTGACCTT CACCGTGTGC CCCGAGTGCC AGGGCACCCG GCTGAGCGAG GGGGCCCGCT CGTCGAAGAT CAACGGCAAG AACATCGCGG ACCTGTGCGC CATGCAGATC AGCGACCTGG CCGACTGGGT CCGGGAACTC GACGAACCGT CGATGGGGCC GCTGATCACC GCGTTGAGCC AGACGCTCGA CTCCTTCGTC GAGATCGGCC TGGGGTACCT GTCCCTGGAA CGGTCCTCGG GCACGCTGTC CGGCGGCGAG GCGCAGCGCA CCAAGATGAT CCGGCACCTG GGGTCGTCGC TGACCGACGT CACCTACGTC TTCGACGAGC CCACCATCGG CCTGCACCCG CACGACATCG CCCGGATGAA CAGCCTGCTG CTGCAGTTGC GGGACAAGGG CAACACGGTG CTGGTGGTCG AGCACAAGCC GGAGGCGATC GCCATCGGCG ACCACGCGGT CGACCTCGGT CCCGGGGCCG GCGCCGGCGG GGGCGAGATC GTCTACGAGG GCACCGTGGC CGGGCTGCGG ACCAGCGGCA CCCTGACCGG GCAGCACCTG GACGACCGGG CCGCGCTCAA ACCCTCGGTG CGCACGTCGA CGGGCGCGCT GGAGGTGCGC GGTGCGGACA CCAACAACCT GCGCCGGGTC GATGTCGACG TGCCGCTGGG TGTGCTCGTC GTGGTGACCG GCGTCGCCGG GTCCGGCAAG AGCTCGCTCA TCCACGGGTC GCTGTCCCGA GTCGACGGTG TCGTCACCGT CGACCAGGGC GCGATCAAGG GATCCCGGCG CAGCAACCCG GCCACCTACA CCGGGCTGCT CGAACCGATC CGCAAGGCCT TCGCCAAGGC CAACGGAGTC AAACCCGCCC TGTTCAGCGC GAACTCGGAG GGTGCCTGCC CGAACTGCAA GGGCGCCGGG GTGATCTACA GCGACCTGGC CATCATGGCT GGGGTGGCCA CCCCGTGCGA GGTGTGCGAG GGCAAGCGCT TTCAGGCCGA GGTGCTCGAG TACACCTTCG GCGGCCAGGA CATCAGTCAG GTGCTGGCCA TGTCCGTCGC CCAGGCCGAG CAGTTCTTCA GCGTCGGCGA GGCGAAACTG CCGGCGGCAC ACAAGATCCT GGCCGCCCTG GTCGACGTCG GGCTGGGCTA CCTGTCCCTC GGGCAACCGC TGACCACCCT GTCCGGCGGG GAGCGGCAAC GGATCAAGCT GGCCACCCAC ATGGGGGAGA AGGGCGGGGT CTACATCCTG GACGAGCCGA CGACCGGCCT GCACCTGGCC GACGTGGAGA ACCTGCTCGG TCTGCTGGAC CGGCTCGTCG ACACCGGCAA GTCGGTCATC GTCATCGAGC ACCATCAGGC CGTGATGGCG CACGCCGACT GGATCATCGA CCTGGGTCCG GGGGCCGGAC ACGACGGCGG CCGGATCGTC TTCGAAGGCA CTCCCGCCGA CCTGGTCGCC GACCGGTCGA CGCTCACCGG CCAACACCTG GCCGACTACG TGGGTCGCTG A
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Protein sequence | MSTATTTGTS PADPPAADRH DMIRVHGARV NNLKDISVEI PKRRLTVFTG VSGSGKSSLV FGTIAAESQR LINETYSAFV QGFMPTLARP DVDVLDGLTT AIIVDQERMG ANPRSTVGTA TDANAMLRIL FSRLGQPHIG SPQAFSFNVA SISGAGAVTF ERAGQTTKER REFSITGGMC PRCEGIGRVN DFDLTALYDE NKSLNEGALI IPGYSMDGWF GRIFRGCGYF DPDKPIRRFT KKEMHDLLYR EPTKIKVEGI NLTYEGLIPK IQKSMLSKDV EAMQPHIRAF VERVVTFTVC PECQGTRLSE GARSSKINGK NIADLCAMQI SDLADWVREL DEPSMGPLIT ALSQTLDSFV EIGLGYLSLE RSSGTLSGGE AQRTKMIRHL GSSLTDVTYV FDEPTIGLHP HDIARMNSLL LQLRDKGNTV LVVEHKPEAI AIGDHAVDLG PGAGAGGGEI VYEGTVAGLR TSGTLTGQHL DDRAALKPSV RTSTGALEVR GADTNNLRRV DVDVPLGVLV VVTGVAGSGK SSLIHGSLSR VDGVVTVDQG AIKGSRRSNP ATYTGLLEPI RKAFAKANGV KPALFSANSE GACPNCKGAG VIYSDLAIMA GVATPCEVCE GKRFQAEVLE YTFGGQDISQ VLAMSVAQAE QFFSVGEAKL PAAHKILAAL VDVGLGYLSL GQPLTTLSGG ERQRIKLATH MGEKGGVYIL DEPTTGLHLA DVENLLGLLD RLVDTGKSVI VIEHHQAVMA HADWIIDLGP GAGHDGGRIV FEGTPADLVA DRSTLTGQHL ADYVGR
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