| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2875 |
|---|
| Symbol | |
|---|
| ID | 8448488 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 3138776 |
|---|
| End bp | 3141583 |
|---|
| Gene Length | 2808 bp |
|---|
| Protein Length | 935 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645041963 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003202205 |
|---|
| Protein GI | 258653049 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00707344 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0310527 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATCGCT CATTGGGCAC CGTTGAAGAG TTCGTCTCTC GCCTCCCGGG CGGGGCCGAC
CTACTGTCGT CCATCGGCAC GATCGTCGAC GCGACCCCGT TACGTCGCAT CCACCTTCAG
GACCTTCGTG TCGAGGACGT GTTCTCCGGT ACCGAGATCA ACCTGGCGCT GCTGGTCGAC
GGAACCATCG AGCTCAAGGT TCCCGGGTTC CCGGCGCTCT CGATCACCAT CGGGGCGACC
GACGACGCGT ACACCGCAAT ACGCGGGGTG GTCACCGTCG GCGAGACGTC CGACCTAACG
TTTCCGGACA TCCGGGCAAC CCTGCGCCTG GACACGCCGC TATTACGAAC CGTCGATCCC
CCCGGTCCGT TGGAGGTCAC TGTCCAGGGG TCCTTCTCGA TGGACCGCGG CGTCAACATC
AGGGCATCCC TCGCGGGCTT CAGCCTGCCT CAGGTCATGA TCGGCAACAC CGGCCTGCTG
GTCAGCGCCT CCCAGTGCGT CCTCGACCTG GCCGACGACA CCACGCCCGA CGCGATCACC
GCGCTGGGCT TCGGTCCGGA GTTCCGCGGG ATCCATGCCG CCACCGCCAC GCTGATGTGG
TTGCCGCAGA CCGTGTTTAA CGGGCTGCCC GGCCTGCGGC TGGATCTCGT CGACCTCGCG
ATCGGGACCG AAGGCGTCTC GTTCGACATC GCGCAAACGT TCACGCTGGA CGACGACGGC
CGGCACATCC TACCAACGTC CGAGCGCGCG GGCCACCTGT TCGACACCGG CTTCGAGCTC
GGGCTGCGGG AAGTCACCGG GCAGGTGCGC ACGAATGTGC CGACGGCGTT CGGCGTCAGC
GGCCTTTTGC GGGTGCCGTT CCTCGACGCG CTATTCGCAG TGGAGTTCGG CGTGCGCCCA
GAGGAGGAGG GCCACGCGAT CGCCGTGTCG CTCACGCAGT CCTCCTCCAC GATCGACCTC
GATCTCGGCG CCGGGAGCCT GACTGTCGAG AGGCTTCACA TCGACGGCGT CGTAGACGAA
ACAGGATTCA CCGTCACCGG CAGCGTGAGC GGTGCCCTAA GTCTCGATCC GTTGGACGTC
CTGATCGATC GCGCACAGGT CAGTCTCCGG CACGACGCCG ACCACGATTC CCTCGAGATC
GAACTGAACG GGCTCGACCT CGGCCCGCTC GGCGAGGTCG AGTCGGCGAA ACTGCGGATC
ATCAGCAGGG TCGACGACGC CGACGTCAGG ACGAACTCCG TCGTAATCGA GGGGACCTAT
CGGTGGGCCG ACCTCGTCCA GCGCTTCGAC CTCACCACCC TCCCCGCACA GTTCCCGCTG
CCACCTGACG ACGGTCTGAT CACCGCCTTC CTGTCATGGG AGGACGACGG GAACGGCGGT
TTCGAGATCG TCGTGCGCTT CGACGCGTCA GTCGAGCACC CGGACTCGCT GTGGCAGTTC
ATTCCGTCCG ACTTCCGGCC GGAAGTGCAC ACGTTGGTGT TCACCGCCGA GGTGCGATAT
GCACACGCGG CTGCCTTCGC CGGTGAACCA TCGGGAAGCG AGTTCAAGGC CGAGCTATCG
GCGAAGGTGA CCGTGCGGCT GCCGGCACTG CCTCATTTGG CCGTCAATCT CGTCACAGTC
CACACCGGCG GGGATGACGG GCTCGTCGAG GGCACGATAC GTGCAGGGAT CGACCAGGCG
GGCACCGGCT ATCTGCGCGT GACCGTGTCC GACCCGGTCG CCATTGACTT CGATCTGCCG
GGCATGCCGC AACCGGAACC CTTCCTGCAC GCCGAGATCA CCTCCATCGA CTTCGATCTC
GCCGCGGGTT CCGTCGCGGA GGGCGGATTC ACCATGTTGG GCACCTTCTC GGTGCGTCCC
ATCAACCCGC CGCTGCCTGC TCCCCTCACC TCGCATTTGC AGGGGCTGTT CGAGTCAGTG
GACGTCGGTG ACCTGACCGG CACGACCGAG CTGAGCCTCC GATTCCGTGA CGACAGGGCT
GCTGTAGTCC TGGACTGCAC GTTCTCCGCG GGGGCCATCG ACGTCAATGT GTTCGAAATG
CTCGGCGGAG TGGCTGGCGC GCTGGGCGTC CCCCCGGACG CCGACCCGCC CCGGGGGGCA
GCCGCGCTGG ACATCGCCGT TGGTGTCGGG CTGCGCGGCC TGCGATTTCA GCTGGGCTCA
CTGGTCGCCG GCGGAGCCGG CGAGACGGCG TCCTTGGAGC TGCGCGCTGA CCTGCGGCTG
GCAGACCTCG CCGTTCCGTT GCTGTTGCGA CTGTCGAACC TCGAACTGGC GCTCGGACTG
GACGCGATCG ACATCCCGCT GCGACCCCCC CGGTTCCCCC TGAGCCCTTC AGACCTTGCT
GGCCTGACCA CCGATGCAGC CTGGCAGAGC AGGATTGACG GGCTGGCGTC GGCCGCCGTC
AGCCAACCGA TGACCTCGGC CGGAGCGGCG GAGGCAACCC GAATCGCTGC TCAGTTGACC
CTTCTGCAGG CGCTTTTCGC GATCCGCCAA GCCATGGAAC CGGGTAGCCG CGGGGGTTTC
GAGGACGGAG CCGGAGTCGT CATCGGCGTG CTGGACGCAG CCAGCGGAGT CATGACGCCG
GCCAGTGACA TCTCTCTCGC GCTTCGTGCA ATTCGGATCG TGATCCCGTT CGCCGACCCT
CGTGACGTTC GTGTCGAAGG TGGCGCCAGC CTGACCGGCT TTGCTGCCGA CGACCCGCTG
AAGGCGCTGG AGGGCCTGCA GTTGGGGTTG GGCATCTCTG CGGACACGAT CTTCTTTTCC
CTGCAGACGA TCAGCTCGCT AATTCAGATC CCTGACCTTG GTCGCTAG
|
|---|
| Protein sequence | MYRSLGTVEE FVSRLPGGAD LLSSIGTIVD ATPLRRIHLQ DLRVEDVFSG TEINLALLVD
GTIELKVPGF PALSITIGAT DDAYTAIRGV VTVGETSDLT FPDIRATLRL DTPLLRTVDP
PGPLEVTVQG SFSMDRGVNI RASLAGFSLP QVMIGNTGLL VSASQCVLDL ADDTTPDAIT
ALGFGPEFRG IHAATATLMW LPQTVFNGLP GLRLDLVDLA IGTEGVSFDI AQTFTLDDDG
RHILPTSERA GHLFDTGFEL GLREVTGQVR TNVPTAFGVS GLLRVPFLDA LFAVEFGVRP
EEEGHAIAVS LTQSSSTIDL DLGAGSLTVE RLHIDGVVDE TGFTVTGSVS GALSLDPLDV
LIDRAQVSLR HDADHDSLEI ELNGLDLGPL GEVESAKLRI ISRVDDADVR TNSVVIEGTY
RWADLVQRFD LTTLPAQFPL PPDDGLITAF LSWEDDGNGG FEIVVRFDAS VEHPDSLWQF
IPSDFRPEVH TLVFTAEVRY AHAAAFAGEP SGSEFKAELS AKVTVRLPAL PHLAVNLVTV
HTGGDDGLVE GTIRAGIDQA GTGYLRVTVS DPVAIDFDLP GMPQPEPFLH AEITSIDFDL
AAGSVAEGGF TMLGTFSVRP INPPLPAPLT SHLQGLFESV DVGDLTGTTE LSLRFRDDRA
AVVLDCTFSA GAIDVNVFEM LGGVAGALGV PPDADPPRGA AALDIAVGVG LRGLRFQLGS
LVAGGAGETA SLELRADLRL ADLAVPLLLR LSNLELALGL DAIDIPLRPP RFPLSPSDLA
GLTTDAAWQS RIDGLASAAV SQPMTSAGAA EATRIAAQLT LLQALFAIRQ AMEPGSRGGF
EDGAGVVIGV LDAASGVMTP ASDISLALRA IRIVIPFADP RDVRVEGGAS LTGFAADDPL
KALEGLQLGL GISADTIFFS LQTISSLIQI PDLGR
|
|---|
| |