| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2812 |
|---|
| Symbol | |
|---|
| ID | 8448425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 3081215 |
|---|
| End bp | 3082009 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645041904 |
|---|
| Product | thymidylate synthase |
|---|
| Protein accession | YP_003202146 |
|---|
| Protein GI | 258652990 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0207] Thymidylate synthase |
|---|
| TIGRFAM ID | [TIGR03284] thymidylate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0000021691 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0000331365 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCAGT ATCTGGACCT GATGGACCGC ATCCTGACCA CCGGCGCCGT CAAGTCCGAC
CGAACCGGGA CCGGCACCCG CAGCATCTTC GGACATCAGA TGCGCTTCGA CCTGTCGGCC
GGCTTTCCGT TGGTCACCAC CAAGAAGGTG CACACGCGCT CGGTGATCGT CGAGCTGCTG
TGGTTCCTGC AGGGTTCGAC CAACGTGCAC TGGCTGCAGG AACGCGGCGT CACGATCTGG
GACGAATGGG CCGACGCCGA CGGTGAACTC GGACCCGTCT ACGGCCATCA GTGGCGGTCC
TGGCCGGCCC CGGACGGGCG GCACATCGAC CAGATCGCCG GTCTGGTTCG TTCGTTGCGC
AGCAACCCGG ACTCGCGGCG GCACATCGTC TCGGCCTGGA ACGTGGCCGA GGTGGACCAG
ATGGCTCTGC CGCCCTGCCA CACGATGTTC CAGTTCTACG TCGCCGACGG TGCGTTGTCC
TGCCAGCTCT ACCAGCGTTC GGCCGACGTG TTCCTGGGTG TGCCGTTCAA CATCGCCTCC
TACGCGTTGC TGACCGGCAT GATGGCCCAG GTCGTCGGCC TGCGGCCGGG CGAGTTCATC
CACACGTTGG GCGATGCCCA CCTGTACGCC AATCACCTGG ATCAGGCCCG GCTGCAGCTC
ACCCGCGCCC CGCGGCCGCT GCCCGAACTT GAACTCAAGC CGGACGTCAC CGAGATCGAC
GCGTTCACCG TGGACGACAT CGTGATCCGG AACTACGACC CGCATCCGGC GATCAAGGCC
CCCATCGCGG TGTGA
|
|---|
| Protein sequence | MQQYLDLMDR ILTTGAVKSD RTGTGTRSIF GHQMRFDLSA GFPLVTTKKV HTRSVIVELL
WFLQGSTNVH WLQERGVTIW DEWADADGEL GPVYGHQWRS WPAPDGRHID QIAGLVRSLR
SNPDSRRHIV SAWNVAEVDQ MALPPCHTMF QFYVADGALS CQLYQRSADV FLGVPFNIAS
YALLTGMMAQ VVGLRPGEFI HTLGDAHLYA NHLDQARLQL TRAPRPLPEL ELKPDVTEID
AFTVDDIVIR NYDPHPAIKA PIAV
|
|---|
| |