Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2567 |
Symbol | |
ID | 8448178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 2815732 |
End bp | 2816868 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 645041667 |
Product | histidine kinase |
Protein accession | YP_003201911 |
Protein GI | 258652755 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0076552 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00389148 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGATTC GGATGCCCCT GCGGTTGTTC TTGTCCTACG CCCTCGTGGC TTCCGTCGGA GCCGTCGTGG CGTACCTGAC GGTGTGGCTG CTTGCGCCGG CCCTGTTCGA TCGCCAGGTC GGCATGATGA ACAACGGCGG CATGGGCTCG GGGTCGGGGG GCGGAGCGCA GGCCGGTTTG CGTGACGCGT TCCGGTTCGC CCTCACCACG GCCCTGGCCG TCGGGCTCAC CGCCAGCGTG GTGGCCGCCG TCGTCGTGGC CTGGTTCGTC ACGCGCCGGC TGATGCGCCC GCTGCACGCG GTGCGGGCGG CCACCCGGCG GATCGCGGCG GGTGACTACC GAGTCAGCGT GCCGGTGCCG AGGGAGCCGG AACTGGCCGC GCTGGCCACC GATGTGAACA CCCTGGGCTC CGCGCTGGCC GACACCGAGG CCCGCCGCAC TCGGCTGCTC GGCGATGTCG CGCACGAACT GCGCACGCCG TTGACCGCCC TGGACGGATA TGTCGAGGGC CTGATCGATG GAGTGTTCGC GCCGACTCCG GACATCCTTG GGTCGCTCAG TGACGAGCTG CGCCGGCTGC ACCGGTTGGC CGAGGACCTT TCCAGTCTGT CCCGGGCCCA GGAGCAGGGC CTGGATCTGC ATCCGGTCGA CGCGGACCTC GCCGACCTTG CTCGTCGTGC GGCCGCCCGG CTGGCCCCGC AGTTCCGGGA CGCGCAGGTC ACGTTGACCG TCCAGGCCGA CCAGATGGTG CCGGTCACCG CCGATCCCGA CCGGATCATC CAGGTGCTGA CGAACCTGCT CGGCAACGCG CTGCTCGCCA CCGCGGCGGG CGGGGCCGTG ACGATTGCCG CCCGCGCCGG CGCCCGGAGC GGCGAGGTCT CGGTGACCGA CACCGGGGTG GGTCTGGCCG AGGCGGACCT CGAACGGGTC TTCGAGCGCT TCTACCGGGC GCCGGGCCAG CCTCGCCGGT CGGCCGGGTC GGGCATCGGG CTGACCATCG CCCGGGACAT CGCCCGCGGA CACGGGGGAA ACGTGACCGC CTCCTCACCC GGCCCCGGTC AGGGCGCCCG CTTCACGGTG ACCATTCCGC TGCGTGCGCA TCGGCGCTCC GAAATCGCCG AGCACCTTCA GAGCTGA
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Protein sequence | MTIRMPLRLF LSYALVASVG AVVAYLTVWL LAPALFDRQV GMMNNGGMGS GSGGGAQAGL RDAFRFALTT ALAVGLTASV VAAVVVAWFV TRRLMRPLHA VRAATRRIAA GDYRVSVPVP REPELAALAT DVNTLGSALA DTEARRTRLL GDVAHELRTP LTALDGYVEG LIDGVFAPTP DILGSLSDEL RRLHRLAEDL SSLSRAQEQG LDLHPVDADL ADLARRAAAR LAPQFRDAQV TLTVQADQMV PVTADPDRII QVLTNLLGNA LLATAAGGAV TIAARAGARS GEVSVTDTGV GLAEADLERV FERFYRAPGQ PRRSAGSGIG LTIARDIARG HGGNVTASSP GPGQGARFTV TIPLRAHRRS EIAEHLQS
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