| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2352 |
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| Symbol | |
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| ID | 8447963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 2592184 |
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| End bp | 2593017 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 645041473 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003201717 |
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| Protein GI | 258652561 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00008626 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00410102 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGTCGAG TAGAAGGCAA GGTCGCCTTC GTCACCGGGG CCGCGCGGGG TCAGGGCCGC
AGCCACGCCG TCCGGCTGGC CGAGGAGGGG GCCGACATCA TCGCGATCGA CATCTGCGAC
CAGATCGACA CGGTGCCGTT CCCGATGGCC TCACCGGCCG ACCTCGAGCA AACCGTGAAA
GAGGTCGAGG CCCTCGACCG GCGCATCGTC GCCGTCCAGG CCGACGTGCG GGACTACGAC
GCGCTGAAAT CGGCCGTCGA TGCCGGGGTC GCCGAGCTCG GCCGGCTCGA CATCGTCAGC
GCCAACGCCG GTATCGCGGG TGGGAACCGG CCGTCGTGGG AGCAGAGCGA GCAGGAGTGG
CACAACACGA TCGACGTCAA CCTGACCGGG GTCTGGCACA CGGCCAAGGC GGCCGTGCCG
CACCTGCTGG CCGGTGAACG GGGCGGCTCG ATCGTGCTGA CCAGCTCGGC GGCCGGCCTC
AAAGGCATGC AGAACATCTC CGACTACGTC TCGGCCAAGC ACGGTGTCGT CGGTCTGATG
CGCACGCTGG CGCTGGAACT GGCTCCGCAC AGCATCCGGG TGAACAGCGT CCACCCGACC
GTGGTGAACA CCCCGATGAT CCAGAACAGC TGGACCGCCG GGCTTTTCCG GCCCGACCTG
GAGAATCCGA CGATCGAGGA CGCGCACGAG GTGTTCCGCA GCCTGAACGT GCTGCCGATC
CTGTGGGTGG AACCGGTGGA CATCAGCAAC GCGGTGCTGT TCCTGGCCTC TGACGAGGCC
CGGTACATCA CCGGGGTCAC CCTGCCCGTC GACGCCGGTT TCGGCATCAA GTAA
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| Protein sequence | MGRVEGKVAF VTGAARGQGR SHAVRLAEEG ADIIAIDICD QIDTVPFPMA SPADLEQTVK
EVEALDRRIV AVQADVRDYD ALKSAVDAGV AELGRLDIVS ANAGIAGGNR PSWEQSEQEW
HNTIDVNLTG VWHTAKAAVP HLLAGERGGS IVLTSSAAGL KGMQNISDYV SAKHGVVGLM
RTLALELAPH SIRVNSVHPT VVNTPMIQNS WTAGLFRPDL ENPTIEDAHE VFRSLNVLPI
LWVEPVDISN AVLFLASDEA RYITGVTLPV DAGFGIK
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