Gene Namu_2350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2350 
Symbol 
ID8447961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2590474 
End bp2591166 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content72% 
IMG OID645041471 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003201715 
Protein GI258652559 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0000443807 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00368666 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACCGAAC CCGCCGCCGT CCCCGCCGAA CCACCCGTCG GCCCCTCGCG CCGCCCGGGT 
CGGCAGCCGG CCAGCTCGCG CACCGAGATC GAACACGCCG CGTTCCGGCT CTTCGACGAG
CGCGGCTTCG AGCAGACCAC CGTGGACGAC ATCGCCGGGG CCGCCGGGAT TGCCCGGCGC
ACCTTCTTCA GCTACTTCGC CTCGAAGAAC GATGTGCCGT GGGGCTCGTT CGACCGCGAA
CTGGACTACC TGCGCGCGGT GCTGGACCAG ACGCCGGACA GCGTCCCGGT GATGGAGGCG
ATCCGGCGGG CGGTCCTGGC CTTCAACACC GTCGACCCCG CCGAGCAGCC CTGGCATCGC
AAGCGGCTGG CCCTGATCCT GAGCACCCCG GCCCTGCAGG CCCATTCCAC CCTCCGGTAC
GCCCAGTGGC GGCAGGTCGT CTGCGAGTTC GTGGCCCGTC GGCTGGTCGC ACCGGTCGGT
TCGCTGCTGG TCCAGACCAT CGGTTACGCC TCGCTGGCCG CGGCCATCGC CGCCTACGAC
GTCTGGTTGA CCCAGGACGA TGCCGACCTG CTCGACCTGC TGGACACCGC CTTTCGCGAT
CTGGCCGACG GCTTCGCCCG GGCGCAGCCG CCCCGGACGC TCACGCCGGT TCGGTCAGAC
CGGCCCGCAA CGCCGCCAGC TCGTCCTCGG TGA
 
Protein sequence
MTEPAAVPAE PPVGPSRRPG RQPASSRTEI EHAAFRLFDE RGFEQTTVDD IAGAAGIARR 
TFFSYFASKN DVPWGSFDRE LDYLRAVLDQ TPDSVPVMEA IRRAVLAFNT VDPAEQPWHR
KRLALILSTP ALQAHSTLRY AQWRQVVCEF VARRLVAPVG SLLVQTIGYA SLAAAIAAYD
VWLTQDDADL LDLLDTAFRD LADGFARAQP PRTLTPVRSD RPATPPARPR