Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2350 |
Symbol | |
ID | 8447961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 2590474 |
End bp | 2591166 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 645041471 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003201715 |
Protein GI | 258652559 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0000443807 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00368666 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGACCGAAC CCGCCGCCGT CCCCGCCGAA CCACCCGTCG GCCCCTCGCG CCGCCCGGGT CGGCAGCCGG CCAGCTCGCG CACCGAGATC GAACACGCCG CGTTCCGGCT CTTCGACGAG CGCGGCTTCG AGCAGACCAC CGTGGACGAC ATCGCCGGGG CCGCCGGGAT TGCCCGGCGC ACCTTCTTCA GCTACTTCGC CTCGAAGAAC GATGTGCCGT GGGGCTCGTT CGACCGCGAA CTGGACTACC TGCGCGCGGT GCTGGACCAG ACGCCGGACA GCGTCCCGGT GATGGAGGCG ATCCGGCGGG CGGTCCTGGC CTTCAACACC GTCGACCCCG CCGAGCAGCC CTGGCATCGC AAGCGGCTGG CCCTGATCCT GAGCACCCCG GCCCTGCAGG CCCATTCCAC CCTCCGGTAC GCCCAGTGGC GGCAGGTCGT CTGCGAGTTC GTGGCCCGTC GGCTGGTCGC ACCGGTCGGT TCGCTGCTGG TCCAGACCAT CGGTTACGCC TCGCTGGCCG CGGCCATCGC CGCCTACGAC GTCTGGTTGA CCCAGGACGA TGCCGACCTG CTCGACCTGC TGGACACCGC CTTTCGCGAT CTGGCCGACG GCTTCGCCCG GGCGCAGCCG CCCCGGACGC TCACGCCGGT TCGGTCAGAC CGGCCCGCAA CGCCGCCAGC TCGTCCTCGG TGA
|
Protein sequence | MTEPAAVPAE PPVGPSRRPG RQPASSRTEI EHAAFRLFDE RGFEQTTVDD IAGAAGIARR TFFSYFASKN DVPWGSFDRE LDYLRAVLDQ TPDSVPVMEA IRRAVLAFNT VDPAEQPWHR KRLALILSTP ALQAHSTLRY AQWRQVVCEF VARRLVAPVG SLLVQTIGYA SLAAAIAAYD VWLTQDDADL LDLLDTAFRD LADGFARAQP PRTLTPVRSD RPATPPARPR
|
| |