| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2339 |
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| Symbol | |
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| ID | 8447950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 2579213 |
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| End bp | 2581330 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 645041460 |
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| Product | putative transcriptional regulator, PucR family |
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| Protein accession | YP_003201704 |
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| Protein GI | 258652548 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2508] Regulator of polyketide synthase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00013602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000729233 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCTCGG CCCAACCGCT GACCGCGCTG CCGGCCATCC CGCTGCCCGG GGACGCCGGC
CCGGTCGACG AGCTGGCCGC CGTGATCGCC CTGCTGCAGA CCCAGCCCGC CGACTCCACC
GGTGCGGCAA CGGATCTGGC CGCACGGGCG AGCGCCCTGG TGGGGGCCCC GGTGACCGTC
CTGGATGAGC GGTCCGGCGT GCTGGCCGGT GACCCGACCC GGGTGGCCGG GCAGGTGGCC
GCGCCCGACG GCTCGGTCGC CCTGGGCTGG GGTCCGGCCG CGGACGACGC CGAGCGCTGG
CGCCCGCTCC TGACCCAGGC CTGCGTGTGG CTGTCGATGA TCCGGCGGCT GGACGGGGCG
CCGGCGGTCG AACCGGAGAG CGTCGCCGTC CGCGAGGTCG TGCAGCAGTT GCTCTCGGTA
CGCGACGTCG ACCAGGTCCT CACCTCGATC GCCGAGCGCA CCCTGCGGCT GCTGGACGCC
GACATCTGCG GCGTCATGCT CCGGGAGGGC GAGCGGGTCT GCATGCGAGC CTGTGTCGGC
AACCGGGTCG CGCAGACCGC GCGGCTACGG ATGCGCCGCG GCCAGGGCCT GGCCGGGCTG
GTCTTCGACA TCGGTCGCCC GGCCAAGGTC GACACCTATC TGGAGGACCG GACAATCAGC
CCGGACTTCA TGTCGCTGGC CGAGCAGGAG GAGACCCGGT CCGCGCTGGC CGTCCCGCTA
CGCCTGCACG GCGAGCTGAT CGGGGTGTTG GAGGTGTGGC GGCGCCGACC CTCGACGTTC
ACCGAGCACG ACGAACACCG GATGGTGGTG CTGGCCGACA TCGCCACCGT GGCCATCGAC
AACGCCCGGC TGCACGACGA GCAGGCCGCC TCGACCGTCG AGGCCGAGCG GGCCCGGGAC
GAGCTGCAGC AGCAGGTAGC CATGCTCAAC GGCTCCTCCC GGCTGCAGCA GAAACTGCTC
ACCACCGTGA TCGAGGGCGG TGGCCTGCCG GCCGTCGTGC ACGCGGTGGC CATCGAACTC
GGCTGCGAGG TCGGTGTTTT CGGACCGGAC GGGGCGATGA TCGCCACCCA TACCCCAGGC
TCGACACCGG CGTCGTTGCC GGCCCGGCTG CCGGTGCGCG CCCGCCCGGC AACCCCGGGC
CGCTGGGTTC GGCCGGTCTA CGCCGACGGG GACCAGGTCG GCCAGGTGGT GCTGATCCAG
GGCGAGGCGT CGGCCGAGTT GATGGACGCG GTGGCCGGGC AGGTGGCGAT GGCCTGCTCG
CTGGCCCTGC TGCGGGAACG AGCGGCCAGC CGGGCCCGGG CCCAGGCCGT CGACCAGGTG
TTGTGGGACC TGCTGCAGGG CCCGGTGCAG CATCGGGTCG CGGCGCGGTC CCGGGCCCAG
CAGCTGGGCA TCAGCCTGCT CGGGTCGCTG CGGGTCCTGC ACGGCCAGAT CGAGAACGTC
GAGGAGCTCG CGGCCGAGCA GGGCTGGGAC ACCTCGCACA CGGACAAGGT CCGCCGCGGG
GTGCTCCGCG CGGTGCGCGG CGTCGACGAG GCCCGGCGGC TGCCGTTGAC CGGCATGCGC
GGGGACCTGC TGGTCGCCGT CGCCGCCGAT CTGGACCGGG CGTCGGTCAA GGACCTGGCC
GCCGCGACCT GCGCCGCCAT CCACGCCGAG TGGCCGGGCC TGCGGCTGAC CTGGGGGGTC
AGCCGGGAGC GGGCCAACCC GATGGAGCTG CCGAACGCGC TGAGCGAGGC GGAGACCGCC
CTGGCCGCGG CCCGCCGGCT CGGCGGCCGC AACGCGCTGC TGTACGAGGA GCTGGGCATC
GTCCGGTTGC TGCTCGGCTC GGGCAACGAC CCCGACCTGC AGACCTTCAT CGAGGAGGTC
ACCGGCCCGC TGATCGCCTA CGACCGGGAC AACGACGGCG CGCTGATCCG CACCCTGCGC
GCGTTCTTCG ACGCCGATTG TTCCCAACGG GTGGCCGCCG AGCGACTGTT CGTCCACCAC
AAGACGCTTC GGTACCGGTT GGAACGGATC CGGCAGCTCA CCGGGTTGGA CCTGAGCCGG
CACGAGGACC GGATGCGGGC CGATTTCGCG TTGCGGCTGC TGCAGGTCAA CCAGACCTCG
GACGCGATCG GGGACTGA
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| Protein sequence | MASAQPLTAL PAIPLPGDAG PVDELAAVIA LLQTQPADST GAATDLAARA SALVGAPVTV
LDERSGVLAG DPTRVAGQVA APDGSVALGW GPAADDAERW RPLLTQACVW LSMIRRLDGA
PAVEPESVAV REVVQQLLSV RDVDQVLTSI AERTLRLLDA DICGVMLREG ERVCMRACVG
NRVAQTARLR MRRGQGLAGL VFDIGRPAKV DTYLEDRTIS PDFMSLAEQE ETRSALAVPL
RLHGELIGVL EVWRRRPSTF TEHDEHRMVV LADIATVAID NARLHDEQAA STVEAERARD
ELQQQVAMLN GSSRLQQKLL TTVIEGGGLP AVVHAVAIEL GCEVGVFGPD GAMIATHTPG
STPASLPARL PVRARPATPG RWVRPVYADG DQVGQVVLIQ GEASAELMDA VAGQVAMACS
LALLRERAAS RARAQAVDQV LWDLLQGPVQ HRVAARSRAQ QLGISLLGSL RVLHGQIENV
EELAAEQGWD TSHTDKVRRG VLRAVRGVDE ARRLPLTGMR GDLLVAVAAD LDRASVKDLA
AATCAAIHAE WPGLRLTWGV SRERANPMEL PNALSEAETA LAAARRLGGR NALLYEELGI
VRLLLGSGND PDLQTFIEEV TGPLIAYDRD NDGALIRTLR AFFDADCSQR VAAERLFVHH
KTLRYRLERI RQLTGLDLSR HEDRMRADFA LRLLQVNQTS DAIGD
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