Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2275 |
Symbol | |
ID | 8447886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 2509786 |
End bp | 2510499 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 645041397 |
Product | putative transcriptional regulator |
Protein accession | YP_003201641 |
Protein GI | 258652485 |
COG category | [K] Transcription |
COG ID | [COG2345] Predicted transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00171437 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.131971 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAAACCG CTGCCGCGCT CGATGGTGCC CTCGAGGCAC CCTCGACGAA CGACCGCGGC GAGGGCCGGA CCCGTGAGGC GGTCATCCAA CTGCTGCTCG CGGACGGTCC GATCACCGCG GCCGACCTGG CGGCCCGGCT CGGCATCTCG CCGGCCGCGG TGCGCCGGCA CCTGGACCAG TTGCTCGCCG AGGGCGCGGT GCGCTCCCGT GAGGCGTCCG CCCGCGGGCA ACGGGGACGG GGCCGCCCGG CCCGGTCCTA CCTGCTCACC GATGTCGGCC GCGAACGGCT GCCGCACCAG TACGACGACC TGGCCGTGCA GGCGCTGGAA TACCTGCAGC AGGTCGCCGG GCCGGAGTCG GTCTCCGAAT TCGCCCGCCG CCGGGCCGAG GCGATCGTCG AACCGTTCAC CGACCGGTTG GAGGCCGCGC CGGATCTGGC CACCCGGGCC GGGGTGCTGG CCGAGGCGTT GACCGCCGCC GGTTTCTCCG CCTCGCTCGA ACAGGTCGGG GTCGGGCAGC AACTGTGCCA GCATCACTGC CCGGTCGGAC ACGTCGCCGC GAAGTATCCG CAGCTGTGCG AGGAGGAGAT GGCGGTCTTC ACCCGCGCCC TCGGCTCCTA CGCGCAGCGG TTGGCCACGA TCGCCCGGGG GGACCCGGTG TGCACCACCT TCATCCCGCT GGCCACGATC TCCCCGCATC GCAGCTCCGC CTAG
|
Protein sequence | MKTAAALDGA LEAPSTNDRG EGRTREAVIQ LLLADGPITA ADLAARLGIS PAAVRRHLDQ LLAEGAVRSR EASARGQRGR GRPARSYLLT DVGRERLPHQ YDDLAVQALE YLQQVAGPES VSEFARRRAE AIVEPFTDRL EAAPDLATRA GVLAEALTAA GFSASLEQVG VGQQLCQHHC PVGHVAAKYP QLCEEEMAVF TRALGSYAQR LATIARGDPV CTTFIPLATI SPHRSSA
|
| |