Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2193 |
Symbol | |
ID | 8447804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 2421407 |
End bp | 2422564 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 645041315 |
Product | transcriptional regulator, SARP family |
Protein accession | YP_003201559 |
Protein GI | 258652403 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00163999 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00133858 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACGCCCC CGCACCCCGG CCCGCCCGAG GCCGGTGGCG TGTCCCCGAC GCTGGACGTG CGACTGCTCG GACCGCTGGA GCTGCGCCTG GACGGCCGGC CGATCCCGTT GCCGGGCGGC AAACCCAAGG CCGTGCTGGC CGGGTTGCTG GTCAGCCGCA ATCGCGTGGT GCCGGCCGAC TCTTTGGCCG ACGCGATCTG GGACGGTGAG GTGCCGGCCA ACTTCCTGGC CACCCTGCAG GTCCACGTGT CCGCCCTGCG CCGGGCGCTG CGCCCGGTGT CCGACCCGGG GCTGCTGACC GTCACCACCC AGTCGCCCGG CTACCGCGTC GTCGTCGACG ACGCACTGGT CGACGTCGGC CGGTTCGGCC GGTGGGCGCG GGCCGGCAGC GACCTGCTGA CCGCCCGCCG CTACGCCGAG GCGGCCGACC GGCTACGGGC CGCCCTGGCC GAGTGGTCCG GGTCCGCGCT GGCCGACCTG CAGGGCCTGC GGTTCGCCGA CGACTTCGCC GCCGCCGTGG AGGAGGAGCG GCTGGTCGCG TTGCAGGCCC GGATCGAGGC CGACCTGGCC TGCGGGATGG AGTCGGCGGT GGTCGGCGAA CTGGTCACCC TCACCGGCCA GTACCCGTTG CGCGAGCCGT TCTGGATCCA GCTGATCACT GCCCTGTATC GCTCGGGCCG GCAGGCGGAC GCGCTGGACG CGGCCCGCCG CATCCGGACC CTGCTCGACG ACGAACTCGG CATCGATCCC AGCCCGGCGC TGCGGGACCT GGAACGGCAG GTGCTGCGCC AGGAACTGGC AGCGCCCGGA CCGGCCCCCG TGCCGTCGAT GCAGCGCACC GTGGCCGAGA CCGCGGTTGT GCTGTCCAAG GCCCGGGTGC GACTGCCGTC CGGGGAATCG TTGCCGGTGC CCAGCCGGGG TCTGCGCCTG GGCCGGATGG ACGACAACGA CCTGGTGATC GCCGGGGAGA AGGTCAGTCG CTACCACGCG GTGATCGGCG AATCCGCGAA CGGCTTCACG GTGACCGACC TGCGCTCCAC CAACGGCACC CACGTCAACG ACGAGCGGGT GGTGGAGAGC CATCTGCTGC GCGACGGGGA TCGGATCCGC ATCGGCGGCA CCGAATTGAC CTTCCAGCTC GACGCCGAGC CCGCCTGA
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Protein sequence | MTPPHPGPPE AGGVSPTLDV RLLGPLELRL DGRPIPLPGG KPKAVLAGLL VSRNRVVPAD SLADAIWDGE VPANFLATLQ VHVSALRRAL RPVSDPGLLT VTTQSPGYRV VVDDALVDVG RFGRWARAGS DLLTARRYAE AADRLRAALA EWSGSALADL QGLRFADDFA AAVEEERLVA LQARIEADLA CGMESAVVGE LVTLTGQYPL REPFWIQLIT ALYRSGRQAD ALDAARRIRT LLDDELGIDP SPALRDLERQ VLRQELAAPG PAPVPSMQRT VAETAVVLSK ARVRLPSGES LPVPSRGLRL GRMDDNDLVI AGEKVSRYHA VIGESANGFT VTDLRSTNGT HVNDERVVES HLLRDGDRIR IGGTELTFQL DAEPA
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