| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2167 |
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| Symbol | |
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| ID | 8447778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 2387469 |
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| End bp | 2389229 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 645041290 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003201534 |
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| Protein GI | 258652378 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0230616 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000613257 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACCCAGC ACAATCTGAT CAGCCCCACC ATCGAGGATC CGGACGGCGT GGTCGCCGAC
GCGGCGATCG ACCCGGACGA CGCGGCCCTG TCCCACCCGC TGACCGCGGA CGCGGACATC
CGGCCCGAAT CCCCCACCTT CGCCGAGTTC GGCGTGGACG AGCGCATCGT CACCGCGCTG
GCCGACGTCG GCATCGAGCG CACCTTCGCC ATCCAGGCGC TGACCCTGCC CATCGCGTTG
ACCGGCTCCG ACCTGATCGG GCAGGCCCGC ACCGGCATGG GCAAGACGCT GGGCTTCGGC
GTGCCGCTGC TGCAGCGGCT GTCCCACGAC AAGGCCGTGA CCGTCGACGA GAAGGGCAAG
CTGCCGGTCG GCCGCGCCCC GCGCGCCGTC GTCATGGTGC CCACCCGCGA GCTGTGCGTG
CAGGTCACCC GCGACCTGCA CGCGCTGGGC AAGGCGCTCG GCCTGGCGGT GACCGCGGTC
TACGGCGGCC GCGCCTACGA GCCGCAGATC AAGGCGCTGC AGGCCGGCGT CGACCTGGTC
GTCGGCACCC CCGGCCGGCT GCTCGACCTG GCCAACTCCG GGCACCTGGT GCTCGGTGGG
GTCAAGGTGC TCGTCCTGGA CGAGGCCGAC GAGATGCTCG ACCTGGGCTT CCTGCCGGAC
ATGGAGAAGG TCCTGGACCT GGTCCCGACG GTCAAGCAGA CCATGCTGTT CTCGGCGACC
ATGCCCGGCC CGATCCTGAC CCTGGCCCGC ACCTTCATGT CGCGGCCGAT GCACATCCGG
GCCGAGGCCG CCGCCGAAGG CGCCATGCAC AGCACCACCC GGCAGTTCGT CTACCGCGCG
CACGCCCTGG ACAAGGTCGA GATGCTGGCC CGGGTGCTGC AGGCCCGCGG TCGCGGCCTG
ACCATGGTCT TCACCCGGAC CAAGCGGACC GCCGCCAAGG TCGCCGAGGA CCTCGAGGAG
CGCGGCTTCG CGGCCGCCGC CGTGCACGGT GACCTCGGCC AGGGTGCTCG CGAGCAGGCC
CTGCGCGCCT TCCGCGCCGG CAAGGTCGAC GTGCTGGTGG CCACCGACGT CGCCGCCCGC
GGCATCGACG TCGACGACGT CACGCACGTG ATCAATTTCC AGTGCCCGGA GGAGGAGAAG
ACCTACGTCC ACCGGATCGG GCGCACCGGC CGGGCCGGCA AGACCGGCAC CGCCGTGTCG
TTCATCGACT GGGACGACAT CCCCCGCTGG CAGCTGATCA ACCAGGCGTT GGAGCTCAAC
TTCAACGATC CGGTGGAGAC CTACTCCACC TCGCCGCACC TGTTCGCCGA ACTGGACATC
CCCGAGGGCA CCACCGGTGA ACTCCCCCGG GCCGCCCGGA CCCGGGCCGG GTTGGACGCC
GAGCAGGTCG AGGACCTGGG CGAGACGGGC GGCAAGCGCC GCAGCGCCGG CCGCACCCGG
ACCAAGACCA CGCACGCCGA TCGTCCGGCC CGCGCGGACC GTCCGGCCGA CGGCGACCCG
GCGGCCGAGG GCGACGGCGG GACCGGCGGT CGCCGCCGCC AGCGCACCCG CGGCGCCCGG
TCGGCCGACC GTCCGGTCGA GCACGCGATC GACCACCCGG CGAGCCCGGA CGAGACCGGC
GCGGCCGCCG GCCCGTCGAC CGAGGGCACC GAGGGCGCGC CCAAGGCCCG GCGTCGCCGC
AGCCGCCGGC GCACCCGCAG CGGGCAGCCG GTCACCGAGG GCGCGCACGA GGCCGCGCAG
TCGGTCGACG CCACCGTCTG A
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| Protein sequence | MTQHNLISPT IEDPDGVVAD AAIDPDDAAL SHPLTADADI RPESPTFAEF GVDERIVTAL
ADVGIERTFA IQALTLPIAL TGSDLIGQAR TGMGKTLGFG VPLLQRLSHD KAVTVDEKGK
LPVGRAPRAV VMVPTRELCV QVTRDLHALG KALGLAVTAV YGGRAYEPQI KALQAGVDLV
VGTPGRLLDL ANSGHLVLGG VKVLVLDEAD EMLDLGFLPD MEKVLDLVPT VKQTMLFSAT
MPGPILTLAR TFMSRPMHIR AEAAAEGAMH STTRQFVYRA HALDKVEMLA RVLQARGRGL
TMVFTRTKRT AAKVAEDLEE RGFAAAAVHG DLGQGAREQA LRAFRAGKVD VLVATDVAAR
GIDVDDVTHV INFQCPEEEK TYVHRIGRTG RAGKTGTAVS FIDWDDIPRW QLINQALELN
FNDPVETYST SPHLFAELDI PEGTTGELPR AARTRAGLDA EQVEDLGETG GKRRSAGRTR
TKTTHADRPA RADRPADGDP AAEGDGGTGG RRRQRTRGAR SADRPVEHAI DHPASPDETG
AAAGPSTEGT EGAPKARRRR SRRRTRSGQP VTEGAHEAAQ SVDATV
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