Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2093 |
Symbol | |
ID | 8447704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 2310925 |
End bp | 2312379 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 645041216 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_003201460 |
Protein GI | 258652304 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000338796 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0501266 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGACGC ACCCCGCGGG GCCGCGTTCG GGGGAACTGC ACCCCGACCG CCCCGGACAC GGAGCCCCCA CCGACCTCAA CCGGCTCGAC CCGCTGGTCT GGCCGCGCGG GGCCACCCGC AGCCAGGACG GGGCCCTGAA CCTGGCCGGC CTGGACGCCC GCGACCTGAC CGCGCGGCAC GGCACCCCGC TGATGGTCAT CGACGAGGCC GACTTCCGCA GCCGGTGCCA GGACTTCGCC GACGCGTTCG GCGGCGCGGC CAGCGTGCAC TACGCGGGCA AGGCGTTCCT GTGCAGCGAG ATCGTGCGCT GGCTGGCCGA CGAGGGACTC TCGCTGGACG TGTGCACCTC CGGCGAGCTG CGGCTGGCCC TGCGGGCGGG GTTCCCGCCG GAGCGGATCG CGCTGCACGG TTCCAACAAG TCCGACGCCG AACTGGCCAT GGCCGTGCAG CACCGGATCG GCGCGATCGT CGTCGATTCG TTCCACGAGA TCGCCCGGCT GGCCGGGCTG GTCGAGGACC GCGCGTCGGA TCCGGTGCCG GTGATGATCC GGGTCACCGT CGGCGTCGAG GCCCACACCC ACGAGTTCAT CGCCACCGCG CACGAGGACC AGAAGTTCGG GTTCTCGCTG ACCGGTGGGG ACGCGGCCGA GGCGGCCCGC CGGGTGCTGG CCCTGTCCGG TCTGCGGCTG ATCGGGCTGC ACTCGCACAT CGGTTCGCAG ATCTTCGACC CGTCCGGCTT CGAGGTGGCC GCGCACCGGG TGGTCGGCCT GCTGCGCACC ATCGTGGAGG AATTCCCGGC GGCCGCGGAC ACCATCACCA CCCTGGACCT GGGTGGTGGC CTGGGCATCG CCTACACCTC CGACGACGAT CCGCCGGCGC CGGACGTCAT GGCCAAGTCG CTGATCGAGA TCGTCACCCG CGAGTGCCAG CTGGCCGGGC TGACCGTGCC CGCGGTCATG GTCGAACCGG GGCGGGCCAT CGCCGGCCCG GGCACGGTCA CCCTCTACGA GGTGGGCACC ATCAAGGACG TGACCCTGGA CGGCGGGCTG ACCCGCCGGT ACGTCTCGGT GGACGGCGGG ATGAGCGACA ACATCCGGAC CGCCCTGTAC GACGCCGAGT ACACGGTCAC CCTGGCGTCC CGGTCCTCGG ACGCCACCCC GGTGCTGTCC CGGGTCGTCG GCAAGCACTG CGAGAGCGGC GACATCGTCG TCCGCGAGTG CTACCTGCCG GCCGACCTGG CCATCGGCGA CCTGCTGGCG GTGGCGGCGA CCGGCGCGTA CTGCTACGCC ATGTCCAGCA ACTACAACCG GGTGCCCCGC CCGGCCGTGG TGGCGGTGTC CGGCCAGGGA ACCGGCGGAT CGGCCGGAAC CGACGGAGCT GCCGGCGGTG CCACCGACCG GGTGGTGCTG CGCCGCGAGA CCGACGACGA CCTGATGCTC TTGGAGACCC GGTGA
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Protein sequence | MRTHPAGPRS GELHPDRPGH GAPTDLNRLD PLVWPRGATR SQDGALNLAG LDARDLTARH GTPLMVIDEA DFRSRCQDFA DAFGGAASVH YAGKAFLCSE IVRWLADEGL SLDVCTSGEL RLALRAGFPP ERIALHGSNK SDAELAMAVQ HRIGAIVVDS FHEIARLAGL VEDRASDPVP VMIRVTVGVE AHTHEFIATA HEDQKFGFSL TGGDAAEAAR RVLALSGLRL IGLHSHIGSQ IFDPSGFEVA AHRVVGLLRT IVEEFPAAAD TITTLDLGGG LGIAYTSDDD PPAPDVMAKS LIEIVTRECQ LAGLTVPAVM VEPGRAIAGP GTVTLYEVGT IKDVTLDGGL TRRYVSVDGG MSDNIRTALY DAEYTVTLAS RSSDATPVLS RVVGKHCESG DIVVRECYLP ADLAIGDLLA VAATGAYCYA MSSNYNRVPR PAVVAVSGQG TGGSAGTDGA AGGATDRVVL RRETDDDLML LETR
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