| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2087 |
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| Symbol | |
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| ID | 8447697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 2302363 |
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| End bp | 2304363 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 645041209 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_003201454 |
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| Protein GI | 258652298 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000976195 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0252685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGGGC CGGACGCAAC TGCCGACGAG GATGGAATCG ACGCCGGGGT GGTCGGTGAC
GCGTCCGTGC TGGCCCGGGT GTTCGAGGAC TCGCCGGCCA TTCACGTCGC CCTGCAGGGA
CCCGAGCACA CCATCGTCGC CATCAATGCG GTGACCCGGC GGCTGCTGGG GGATCGCCCG
ACGCTCGCCC GGCCGTGTGC GGCCGCCATC CCCGAACTCA TCGGCCGGTC ATTGCTGGAC
CGCCTGGACG AGGTCTACGC CTCCGGTCAG CCCATCACCG CCCGGGATCG GCGGGTGCAC
CTGGACGGCG GCGCCGAGGA CGAGATCGAC CTGGAGTGGT TCGTCACCTT CATCATCTCG
CCGTGGCGGT ACGCCGACGG CACGATGCGT GGCGTCATCG TGCAGGCGGT GGACACGACC
TCGCAGCTGC AGGCCCGCCG CCAGGCCACC CAGAGCGGCA GCGAGTTCCG CCGCCGGTAC
CGGGCCGCCC TGGACGTCAT CGACGAGCTG CAACGCACGT TGCTGCCCTC CAGCCTGCCG
GTGCTGCCGC AGCTGGAGCT GGCTGCCCGG TACCTGCTGG CCGACGTCGA GCACGCCGCC
GGCGGCGACT GGTTCGACGG GTTCATGCTG GCCGACCACC GGCTGGCCGT GGTGGTCGGC
GACGTCGTCG GGCACGGGGT GGCCGCGGCC GGGGTGATGA GCCAGCTGCG GTCGGTGCTG
TCGTACCTGT TGGACACCGG GGTGGAGCTG GCCGAGGCGG TCACCCAGCT CGACCGGTTC
GCCTCCCGCA CGCCGGGTGG GTTCGCGGCC ACCGTGTGCG TCGTGCTGGT CGAACCGGCC
AGCGGCGCGA TGACGTACGT GACCTGCGGG CATCCCGCGC CGATGGTCGT CGACGCGGAC
GGGGTGGCCC GATTCCTGCC GCTGTCCGGG CACCGGCCGC TGGGCGCCGG AGCGTCCGCC
GCGCCGATCA CCGATTCGCT GGGGATCGGG GAGGTGCTGG TGCTGTTCAG CGACGGTCTG
GTCGAGCGGC CGGATCGGAC CTGGGAATCG GGCCTGGCGC TGCTGGCCAC CATCACCGGG
GACGCGGTCC TGGGCCGCGA CCTGCCGGAG GGTTCACCCG AGTCGGTCCC CGAACGGGTG
TGCGCCCACG CCGTGGAGAT GATGACCCGC CCGGGCCACC TGGACGACGT CACCATGGTC
GCGGTGCAGC GGCGCGCGGT GCCGGTCGAG CCCTGGTACG CCGAGTACCC GGCCCGAGCG
GACCGGTTGG AGCTGATCCG GGCCGATCTG CGCAGGTGGC TGCGGGAACG GATGGTCTCC
GCCGAGGACG AGACCGCGCT GACCCTGGCG GTCAGCGAGG CGGCGGCCAA CTGCATCGAG
CACGCGTACC GGGACGGTGA CGAGGGCACG ATCCGGATCC AGGTGAACCT GACCACCAAG
GGTGACGCCT TGCTGGTGGT CGCCGACGAA GGCGGGTGGC GGGACCCGAT CACCAAGGCC
GGTACTCGAG GCCGGGGCCT GGCCATGGTG GCCGACGCGG TCGACGACTT CTCGATCGAC
ACCGAGACCG GGGGCACCGT GGTGCGGATG CGGCGGCGGT TGCACCGGCC GGTCGGCATG
CTCGCCGGAG ACGGCGTGGT CGAGGTCGGC AGCGCCGAAT TCCGGGCCGA ACCGTCCGGG
CCGATCGGGG CCCGGGTCAT CACCGTTTCC GGCTCGGTCG ACCTGGCCTC GGTGCCGGTG
CTGCGCCAGG AGGTGCTGCG GGCCGGCCGC GGCGGCGAGC TCCCGGTGAC CATCGACCTG
ACCGCGGTGA CCCACCTGAG CAGCGCCGGG GTGCAGATGC TGCACACCCT GTCTGCGACC
GGGCAGCCGG GCGCGTTGCG GCATCCGCCG GTGCTGATCG CCGCGTCCGG ATCACCGGCG
GCCTACGTGC TGGACCTGGC CGGGCTGGTC CGGACCAGTG ACGTCACCGA CCGAAGCGAT
CGAGCCGACC GGCACGACTG A
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| Protein sequence | MNGPDATADE DGIDAGVVGD ASVLARVFED SPAIHVALQG PEHTIVAINA VTRRLLGDRP
TLARPCAAAI PELIGRSLLD RLDEVYASGQ PITARDRRVH LDGGAEDEID LEWFVTFIIS
PWRYADGTMR GVIVQAVDTT SQLQARRQAT QSGSEFRRRY RAALDVIDEL QRTLLPSSLP
VLPQLELAAR YLLADVEHAA GGDWFDGFML ADHRLAVVVG DVVGHGVAAA GVMSQLRSVL
SYLLDTGVEL AEAVTQLDRF ASRTPGGFAA TVCVVLVEPA SGAMTYVTCG HPAPMVVDAD
GVARFLPLSG HRPLGAGASA APITDSLGIG EVLVLFSDGL VERPDRTWES GLALLATITG
DAVLGRDLPE GSPESVPERV CAHAVEMMTR PGHLDDVTMV AVQRRAVPVE PWYAEYPARA
DRLELIRADL RRWLRERMVS AEDETALTLA VSEAAANCIE HAYRDGDEGT IRIQVNLTTK
GDALLVVADE GGWRDPITKA GTRGRGLAMV ADAVDDFSID TETGGTVVRM RRRLHRPVGM
LAGDGVVEVG SAEFRAEPSG PIGARVITVS GSVDLASVPV LRQEVLRAGR GGELPVTIDL
TAVTHLSSAG VQMLHTLSAT GQPGALRHPP VLIAASGSPA AYVLDLAGLV RTSDVTDRSD
RADRHD
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