Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2029 |
Symbol | |
ID | 8447638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 2240922 |
End bp | 2241554 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 645041155 |
Product | isopentenyl-diphosphate delta-isomerase, type 1 |
Protein accession | YP_003201401 |
Protein GI | 258652245 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1443] Isopentenyldiphosphate isomerase |
TIGRFAM ID | [TIGR02150] isopentenyl-diphosphate delta-isomerase, type 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.0672691 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00592267 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCCGCCCA TCCGTCATCC CCTGTTCGAC CCGATGCATC CGGGCCGGCT GCACCGGCCG CCCTTCCCGC TCTCGCCGCT GGACGAGAAC GAGCAGGTGG TGCTGGTCGA CGAGGCCGGC ACGGCGATCG GAACGGCCGA CAAGGCCACC GTGCACGGCG CCCACACGCC GCGGCACCTG GCGTTCTCCT GCTACGGGTT CCGCGCCGAC GGGCGGCTGC TGGTCACCCG CCGGGCCCAC GACAAGGCGA CCTTCCCCTC GGTCTGGACC AACACGGCGT GCGGCCACCC GGCGCCGGGG GAGAGCCCGG CGCAGGCCGC GACCCGCCGC CTGCGCTACG AGCTGGGGGT GCAGCCGCGC GAGCTGACCA TGGCCCTGCC GGACTTCTCC TACCGCGCGT TCGACGGGAC GGTCGAGGAG AACGAGCTGT GCCCGGTGCT GGTCTGCCGG ATCGACGACG ACCCGCAGCC CCGCGCCGAC GAGGTCGGCG AGTGGGCCTG GTGGAGCTGG GCGCAGTTCC TGGCCGCCGC GGCCGACCCG GAGAGCGGAT TGTCGCCCTG GTCCCGGGAG CAGGCCCCGC TGCTGGATGC GGTGCTGGGC CGGATCGGGG ACGACGGCGG CTCCGGCCGC TAG
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Protein sequence | MPPIRHPLFD PMHPGRLHRP PFPLSPLDEN EQVVLVDEAG TAIGTADKAT VHGAHTPRHL AFSCYGFRAD GRLLVTRRAH DKATFPSVWT NTACGHPAPG ESPAQAATRR LRYELGVQPR ELTMALPDFS YRAFDGTVEE NELCPVLVCR IDDDPQPRAD EVGEWAWWSW AQFLAAAADP ESGLSPWSRE QAPLLDAVLG RIGDDGGSGR
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