| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1984 |
|---|
| Symbol | |
|---|
| ID | 8447593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 2193267 |
|---|
| End bp | 2194280 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 645041112 |
|---|
| Product | esterase, PHB depolymerase family |
|---|
| Protein accession | YP_003201358 |
|---|
| Protein GI | 258652202 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
|---|
| TIGRFAM ID | [TIGR01840] esterase, PHB depolymerase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.000502853 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.034342 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCCG CCCCGCGCTC CGGCGCGTCC ATCCACCCCG CCGCCATCCT GGCGTCCCTG
TTCGACTGGG CCGCCCCTGT GCTGACGACC GCGCCGGCGC CCCCGGCGGT CCCGACCGTC
CCGGTCGATA GTGAATCCAC ACCGCCATCC CCGGCGACCG AACCCGCATG GCAGACCCTG
CACCTGACCC ACACCGAACC GGCCGGCACC CGCTCCTACG ACCTGTTCCT GCCGAGCGGT
TATACCGGCC AACCGGTCCC GCTGATCGTC ATGCTGCACG GTGGATCTCA GGATGCGGCC
GACTTCGCCG CCGGCACCGG CATGAACGCC CTGGCCGAGG AGCACACCTT CCTGGTCGCC
TATCCCGAGC AGCCCACGGC CGCCAACAGC AGCGGCTACT GGAACTGGTT CCGGCCCGAG
GACCAGCGCG CCGGCGCCGG TGAGCCCGCG ATCCTGGCCG GGATCACCCG CCAGGTCATG
GCCGACCATG CCGTCGACCC GGATCAGGTT TACATCGCGG GATTCTCGGC CGGCGGGGCG
ATGGCCGCCG TCATGGCCGG CGGGTACCCC GAGCTCTACG CCGCCGTCGG CATCCATTCC
GGGCTGGCGC ACGGCGCCGC ATCGCACTTC ATGGGCGCAT TCCTGGCGAT GCAGGCAGGC
GCGACCAACG GCACCGGAAA CACCTTGCCG GTCATCGTCT TTCACGGCGA TCGGGACTCC
AGCGTGGCCC ACAGCAACGC CGAGAAGATC ATCAACGTGC GGCTTTCCGC CGAGCCCGAG
CCGGTCGCCG ACCAGCCTGA ACCGGTCAGC AGCCAGGGCG ACGAGGGCGG GCGCTCCTAC
ACCCGAACCG TGCACGCCGG AACCGATGGC ACCATCGCCG AATCCTGGCT GCTCGAGGGG
ACCGGCCACG CCTGGTCCGG CGGGCGTGCG GGCGGCAGCT ACGTCGACCC CCAGGGGCCG
GACGCCTCCG CCGAGATGGT CCGGTTCTTC GGCGACCATC GCCGCGCCGC GTAG
|
|---|
| Protein sequence | MTAAPRSGAS IHPAAILASL FDWAAPVLTT APAPPAVPTV PVDSESTPPS PATEPAWQTL
HLTHTEPAGT RSYDLFLPSG YTGQPVPLIV MLHGGSQDAA DFAAGTGMNA LAEEHTFLVA
YPEQPTAANS SGYWNWFRPE DQRAGAGEPA ILAGITRQVM ADHAVDPDQV YIAGFSAGGA
MAAVMAGGYP ELYAAVGIHS GLAHGAASHF MGAFLAMQAG ATNGTGNTLP VIVFHGDRDS
SVAHSNAEKI INVRLSAEPE PVADQPEPVS SQGDEGGRSY TRTVHAGTDG TIAESWLLEG
TGHAWSGGRA GGSYVDPQGP DASAEMVRFF GDHRRAA
|
|---|
| |