| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1964 |
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| Symbol | |
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| ID | 8447573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 2166843 |
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| End bp | 2172185 |
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| Gene Length | 5343 bp |
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| Protein Length | 1780 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645041095 |
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| Product | helicase domain protein |
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| Protein accession | YP_003201341 |
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| Protein GI | 258652185 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.285846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0141604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTTC CAACCCCGGG CCAGGTCGAG CGGGAACTAA AGGGTGCGTT TCTACGCTAC
ATTGATACGG CCTACGCACT CCGCGATCCC CATCTTGTCT CGGAGCGTCG CCGCCTATTG
CTTGAGGGGC AAGGAAACCT GTTCGGTCCT CTTATGCTCG AGCCAGTTCT TCCGTACCAA
GGTGTTCTTG ATCTCGCGCA AAGCGCGGCG GCCGCCGGAA TCAACGAGCG CGACCTAACA
GATGTGGTCC GGTCTGTCTT CGGCATTGAG CACTCAAATT CAGTCATGTT GCGGCAACAT
CAAGTGAGAT CCCTTTGCGT ACACTTCAAC ACGGGGCCCG GCCGAAACCC TGTGATTACG
TCCGGTACCG GATCCGGCAA AACCGAATCC TTCCTGATAC CGCTGTTGAC TCGACTAGCG
GCAGAAAAAC GGTCCGCGTG CAAATTGGCC AGCCCTCATC ATTGGTGGAG TATCGCATCA
CAGAATGACC CTTGGCGGCC GACCCGTGCA ACTGGTCCGA CAGTGGCAGC CATGCGTGCG
ATGATTCTCT ACCCAACAAA TGCTCTTGTC GAGGATCAGG TGGCGAGGCT CCGCCGAGCA
GTCCGGGGAC TCCGCTCTCA AGACGAGCCC ATCGATGTGT GGTTTGGGAG ATACACCGGT
GCAACGCCGG GTAGCGGCAA GCCCCCACTC GGACGGGCGT CTGGACGAGA GGTATCAGAC
GTCGCGAAGG GAATGCGGGA TCTGGTGCGG CAAAATTTGC TTCTTGCCGA ACTGGCCGAC
CCCGACCTCA TCAGTCAGTT CCCAGATCCG ACAGCTGGCG AATTGGTGAC CCGCTGGGAC
ATGATCGCCA CCCCGCCAGA TCTGCTTGTT ACAAACTACT CCATGCTAAA CGTGATGCTC
ATGCGTGATG TCGAAGAGCC GATCTTCGAA GCGACTCGTG AGTGGCTGAC TGCATCGAAG
GCCCATGTTT TCACACTTGT CGTAGATGAA TTGCACCTCT ATCGTGGGAG CACGGGCGCC
GAGGTAGGGA TGGTGGTTCG AAATCTCGCC TCCCGGCTTG GCTTGGATTC AGAGTCCGAT
CAACTTAGAA TAATTGCTAC TAGCGCATCA ATTCCAGGCG ATCATTCTGG ACTCGACTAT
CTGGAGCGCT TCTTCGGAGT CGGACGCACG ACTTTTCGGG TCGAGCCTGG TGAGCCTAAG
GAACTAAGGG CGGTCGAAGT TCCTTCTGCG GTCGGCATAC TTTCTATGAG CAGCACACAG
CGTATGGCTG GCGCTTCGGC CCAGAACTGG GCTGAAGCCG TCGCGACGGT GTGCATCAAC
GAGGGTGAGA ACCTGCCTCG TGCTCAAACG CTCGACCAGA TCGCTGGTCG ATTGTTCGGT
GACGACCCGG ATCGCAACGC GGCATTAGAG GCGATTCTGG GCACTCTTGC CGACGTCGCG
AAGCCCTCTG TACAATTTCG TGCCCACATA ATGATGCGGG GCATGAGAGG CCTCTGGGCA
TGCTCCAATT CAAATTGCCC AGGGGTCGTC CCTGAGCCAG GTCGTCGAGT CGGCAAACTC
TACGACACAC CGCGGTCAAG TTGCTTGGTC CCAAAGTGCG GGGCTCGTGT TCTCGAACTC
TTGTATTGTT ATGAGTGTGG GGACGTAAGC CTGGGCGGGT ATATTGTCGA CAAGATGGGG
GATGGCACCG TCGTACTTTC GACAACCCCG GTTAAGGCGG GAGACAATAC TGGGGATCTT
GTCTATCGAC GCACTGACGA CGAATATCGC TGGCTTTGGA TAGGATCACC GGCACCTGAT
GAGCCAATAA GGCATCAGCT GCCGGCCTCA GTGAGCGAAG ACCGTGCGAC TATTGAGTTC
AATTTCGTGG AGGCCATATA TGATCCAGGA TTGGGATCGC TAACGCCCGC GAGCGGCCCA
GGAAACTGTG TGACTATCCG CCACAGCGGC TCGGATTTGG ACGGGGTGGC GATTCCGGCA
TTGCCGGAAG TGTGCCCACG ATGCCATGGC CGTCAGAGCA ATCGTGACTT GTCGGTATTT
TTCGCGGGCT CGGTGAGGTC GCCAATACGT GCTCATACTT CGGGCCGTTC ACAGTTGAAC
CAGATGGCGG TTTCTCAACT TTTTCGCAGC TTGGGTCATG AAGCATCTGA ATCTCGTACG
ATAGTTTTCA CCGATAGTCG CGATGATGCT GCAAGGATAG CCGCGGGGAT CTCACTGAAC
AATTTCCGAG ATCAGGTTCG TCAAGTCGTT CGGCAGCTTT TGCACGATCG GGTTTCACCC
GTCCCCACTC TGCGGGCGTT GATTCGCGGG GCGTTAAACG CGGGTGACGT AGCAATGGCA
CTGAGTATCG CGTCTGGCCG GCGAAGCCTG TATGACAAGC TCAGGTTGGA ACACGCGGGC
CTGGCGACGG ATGAGGATCG CGCAGAGATC GAGTCGGCCG AGCGGGAGGC TGAGACGCTT
CCTTGGGCGC TTATGGTCAG GGAGACGTCT CGTGTGCTTG TGAAGGCGGG TATCAACCCT
GCAGGAGTAG GGCCGTCGGT CGCGCACAGT GTTGGCGACT TGCCCTGGTA CCGGGCCTAC
CCTCCACCGC AAGAAGCAGA TTGGGCGCGC TTGGAGTCAC GGATTGCGGA ACCAGTCCAA
CTTGAACGAG AACGTCTGAC CTCGGAGGCC GTGACTCAAG CGGTCTTTGA CCGCGCGTCC
CGTGATTTGG AGTCAACTAG GCTCGGAGTG GTTCGCGCCG GCATCACCGC GCCGTCTGAC
TGGGGGCTTG CGCAGGAAGA TGCGGATGAC CTGATCTCAA GTGTGCTACG TCTGCTTGGG
ATAGCAAACC GCTATGAGGG TGGCTACGTC GCGATGACCA CCTCGGCGCC GGGCAGCGTC
AGAAGATACC TGACGAAGGT TGCAGTGGGG CAAGGATTGG AGCCGGAGCG CCTGATTGCC
CTCGTTGGCG AGTTCCTCAG GAGTAGCGGG CTGACAGATG ACTCGTGGAC CCTGCGAACC
ATGAGCGGCC AAGATGTGCT GCTCCTCAAG GTTCCGGGGA GCGAGCTTTG GGTCTGCAGC
AATTGTGGAA CCGTTCACCT TCATCGCTCG GTCGGAGTGT GCACGAACGA AGAATGCGTG
AATGGGCGGC TTGAGCCGAC GCCAGTGGGG GAGCAGAACG ACGACTACTA CGGCTGGTTA
GCCAGTCATG AACTGCGCCG GATGCGGGTG GCCGAGCTCA CTGGTCAAAC GAGTCTGTCC
GAGCAGCGTG CACGTCAGCG ACTGTTCCGC GGCGCAGTTC TGCCAGCTCC CCAGGAAAGC
AAACTGGCGG ATCCGCTAGA TCTATTGTCT GTCACGACGA CAATGGAGGT TGGCGTTGAT
ATCGGCTCGT TACGCGCGGT CGCCATGGCT AACATGCCGC CACAGCGCTT CAATTACCAG
CAACGCGTTG GAAGAGCCGG TCGATCGGGG CAGCCTTACT CTTTCGCTTT GACAATTTCC
CGGGATCGGG CTCATGACGA CTATTATTTC CAGTCTCCGG AGCGAATGAC GGCAGCGGAT
CCGCCGCCTC CGTTTATCGA TCTCTCGCGT CCCCGCATCG TCCGTAGGGT TATAGCGGCG
GAGTTGCTCC GGCGTGCATT CTTGAATTGC TCTGATCCTC CCACTCGCAC TGCAGATAGC
TTGCACGGCA CTTTTGGGTC GACAACTGAG TGGATGCAAC GTAGGAATGA CGTCGAAGGA
TGGTTGAGGA CTGCGCGTGA CGTCACCGAC GTGTGTGAGA GGTTTGCAGT ATATACGGCC
ATAGATTCGG CCGGGCTAAT AGGCTGGGCA CGGGCGCAGC TTGTTGCCGA CATAGAAGAA
GCTATAGCAA ATCCCTACTT CGGTCATTCG GAGTTGAGCG AATTGCTGGC GAATGCCGGC
GTGCTACCGA TGTTCGGGTT TCCGACGCGA GTTCGTGCCC TATACTCCGG CCAGATCACG
AGATCTAGCG ACAGTGAAAA GTATAAGGTC GCTGACAGGG ACCTTGGAAT GTCAATCAGT
TCTTTCGCGC CTGGCGCGGT GGTAGTGAAA GATGGGGCGG AGCACTTATG TGTGGGGTTC
GCTGCTTATT CGTTCATTGG AGCGAGCGCA AGGGCCCGGG ACCCGCTAGG GCAGGCGCTC
ATGGTACAGC GGTGCGACGA TTGCGGGAGC CTGAATACTG ATTCAAATGC TGCTGCTGTG
CATTGCTCGG TATGCCAGGG AGACCTTCGG TCGTTCTCCG TTTTTCAACC CGAAGGGTAC
CGTACAATTT ATAGCAGTCC AGACTATGAC GATTCTCACA TTACGCCGAT GTTCTCGGGC
TATACCGAAC TGTCCGCGAA TACGGCTCTG AGTCGTGAGG AGCGGCTCGG CGGCATGTCC
CTTCGGTTGC TCGAGCAGAC CGAGGTTGTG ACGGTCAATG ACAACAATCG GAGGCTGTTT
TCTCTGAGGC GCCTCCATGA TGGATCGATC ATCGCGACGA ATCCAGGACT TTATCGTCGA
CCGTTGCCGG CCTGGATGCA AACGGGCGGG AGCGAGTTGG ACCCTGCGGC CATCGGGGAG
GTGCGTCGCA CGGATGTTCT ACTCATGGGT CTCGATAGTC TAAAGGTGGC GGACGGCGCA
ATTGCCACGC GACATTGGGA TTGTCCCGCG GGATTCGGTG CCCTTGTGTC CTTTGCGGAA
CTGGTGCGCA ATGCAGCCAA AGACTATCTA GACATCGACC AATCGGAACT TGACGTAGGC
TTGCAGCCAA CGCTTCACAA TGGGACTGTC TCGGCGCGTG TCTTCCTGGC GGACGCTTTG
GACAATGGTG CGGGGTACGC TCTGGAGCTT GGGCAGATGC CTACGCTGAG GCGTTTGCTT
GAGTCCATTC GCGAACAAAC TGGCGGCCGC CTTCGAGGTG ATCCGCACGG AAGTGCCTGC
ACATCGTCCT GTCCAGGCTG CCTGAGAAAC TATGAAAACC GATTCTTGCA CTGGGCCCTT
GACTGGCGAT TGGGGCTAGA CGTCGTCGAC CTTGTGCTGG GTCGCGACTT GGATCTTAGT
TCTTGGGCGG TACGCACTGC GGAGGTCGTC GCGAGCTTTC TTGGTGGGTA TGGCGCCTAC
CTGAATGTCG TTGTGGAGGA ACGGAATTCC ATCCCAGTGC TTGTGACCCG CGAGGGTCGA
GGTAGAGCGG TGTTGGTGGG ACATCCGCTT TGGCGGCACG ACCGTGCATA TTGGAATTCG
GTGGTGCGGG ACACGGTCAG CCTGGTAGAG GCGGACGGTA TTGCAGGTGT TTCGGTATCC
GATACGTTCG TGCTGGACAG AACTCCCTCC CGTGTGTTTA CAGCACTTAT TGACGGTATT
TGA
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| Protein sequence | MTFPTPGQVE RELKGAFLRY IDTAYALRDP HLVSERRRLL LEGQGNLFGP LMLEPVLPYQ
GVLDLAQSAA AAGINERDLT DVVRSVFGIE HSNSVMLRQH QVRSLCVHFN TGPGRNPVIT
SGTGSGKTES FLIPLLTRLA AEKRSACKLA SPHHWWSIAS QNDPWRPTRA TGPTVAAMRA
MILYPTNALV EDQVARLRRA VRGLRSQDEP IDVWFGRYTG ATPGSGKPPL GRASGREVSD
VAKGMRDLVR QNLLLAELAD PDLISQFPDP TAGELVTRWD MIATPPDLLV TNYSMLNVML
MRDVEEPIFE ATREWLTASK AHVFTLVVDE LHLYRGSTGA EVGMVVRNLA SRLGLDSESD
QLRIIATSAS IPGDHSGLDY LERFFGVGRT TFRVEPGEPK ELRAVEVPSA VGILSMSSTQ
RMAGASAQNW AEAVATVCIN EGENLPRAQT LDQIAGRLFG DDPDRNAALE AILGTLADVA
KPSVQFRAHI MMRGMRGLWA CSNSNCPGVV PEPGRRVGKL YDTPRSSCLV PKCGARVLEL
LYCYECGDVS LGGYIVDKMG DGTVVLSTTP VKAGDNTGDL VYRRTDDEYR WLWIGSPAPD
EPIRHQLPAS VSEDRATIEF NFVEAIYDPG LGSLTPASGP GNCVTIRHSG SDLDGVAIPA
LPEVCPRCHG RQSNRDLSVF FAGSVRSPIR AHTSGRSQLN QMAVSQLFRS LGHEASESRT
IVFTDSRDDA ARIAAGISLN NFRDQVRQVV RQLLHDRVSP VPTLRALIRG ALNAGDVAMA
LSIASGRRSL YDKLRLEHAG LATDEDRAEI ESAEREAETL PWALMVRETS RVLVKAGINP
AGVGPSVAHS VGDLPWYRAY PPPQEADWAR LESRIAEPVQ LERERLTSEA VTQAVFDRAS
RDLESTRLGV VRAGITAPSD WGLAQEDADD LISSVLRLLG IANRYEGGYV AMTTSAPGSV
RRYLTKVAVG QGLEPERLIA LVGEFLRSSG LTDDSWTLRT MSGQDVLLLK VPGSELWVCS
NCGTVHLHRS VGVCTNEECV NGRLEPTPVG EQNDDYYGWL ASHELRRMRV AELTGQTSLS
EQRARQRLFR GAVLPAPQES KLADPLDLLS VTTTMEVGVD IGSLRAVAMA NMPPQRFNYQ
QRVGRAGRSG QPYSFALTIS RDRAHDDYYF QSPERMTAAD PPPPFIDLSR PRIVRRVIAA
ELLRRAFLNC SDPPTRTADS LHGTFGSTTE WMQRRNDVEG WLRTARDVTD VCERFAVYTA
IDSAGLIGWA RAQLVADIEE AIANPYFGHS ELSELLANAG VLPMFGFPTR VRALYSGQIT
RSSDSEKYKV ADRDLGMSIS SFAPGAVVVK DGAEHLCVGF AAYSFIGASA RARDPLGQAL
MVQRCDDCGS LNTDSNAAAV HCSVCQGDLR SFSVFQPEGY RTIYSSPDYD DSHITPMFSG
YTELSANTAL SREERLGGMS LRLLEQTEVV TVNDNNRRLF SLRRLHDGSI IATNPGLYRR
PLPAWMQTGG SELDPAAIGE VRRTDVLLMG LDSLKVADGA IATRHWDCPA GFGALVSFAE
LVRNAAKDYL DIDQSELDVG LQPTLHNGTV SARVFLADAL DNGAGYALEL GQMPTLRRLL
ESIREQTGGR LRGDPHGSAC TSSCPGCLRN YENRFLHWAL DWRLGLDVVD LVLGRDLDLS
SWAVRTAEVV ASFLGGYGAY LNVVVEERNS IPVLVTREGR GRAVLVGHPL WRHDRAYWNS
VVRDTVSLVE ADGIAGVSVS DTFVLDRTPS RVFTALIDGI
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