Gene Namu_1874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1874 
Symbol 
ID8447481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2058332 
End bp2060614 
Gene Length2283 bp 
Protein Length760 aa 
Translation table11 
GC content71% 
IMG OID645041004 
ProductATP-dependent DNA helicase RecG 
Protein accessionYP_003201252 
Protein GI258652096 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1200] RecG-like helicase 
TIGRFAM ID[TIGR00643] ATP-dependent DNA helicase RecG 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00557261 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0161367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAACAGA TCGGGCTGGA CACGCCGCTC AAGGAGCTGA TCGGTGCCCG GACCGCGGGC 
CGGCTGGCCG ACAAGCTCGA GCTGGCCACG GTCGGCGACC TGCTGCGCTA CTACCCGCGC
AAGTACGACC AGCGAGGCCG GCTGACCGAC TTGGGCAAGC TGGTGGTGGG GGAGCGGGCC
ACCGTGTGGG CCCGGGTGGT CAAGGTGGTG GAGAAGGAGT TGGGCCATCG GGGGCCCGGC
CGCGGCGCCC GCGGTCGCGG CGGCGGGGTC AAGCACATCA CCAAGGTGGT GATCGGCGAC
GACCACCGCC AGCTGACCTG CACCTTCTTC AACCAGTACC ACTGGACAAA GACGCTGCCC
CCGGGCACCG ACGCGATGTT CTCCGGCAAG ATCACCAAGT TCCAGACCGA GCTGCAGATG
AGCTCGCCGT CGGTGGCCAT CCTGTCCGAC GGGCGCGGGT CGGACGGATC CACCGAGAAC
AATCCGATCG AGATCATCGA GTCGTTCCCG GGTGGGGTGA TCCCGGTCTA CCCCTTGGTC
GAGGGCGTCA CCCAGGCCGT TCTGCAGCGC AGCGTGCGGC TGCTGCTGGA CCTGGGGCCT
CGGATCGAGG ACCCGGTGCC CGAGGTGCTG CTGGCCCAAC GGGGCCTGGT CGACCTGGCC
ACCGCCCTGC ACGACATCCA CCGGCCGCGG ACCCAGGAGC ATCTGGATCG GGCCAAGGCG
CGACTGCGCT ACGACGAGGC GCTCTCGGTC CAGCTGGTGC TGGCCCGGCG CAAGGCGCTG
GCCCGGGAGT TCCCGGCCGA ACCGTGCCCG CGGGTGCCGG GCGGGCTGTT GGACGCCTTC
GACGCCAACC TGCCGTTCGA GCTGACCGCC GGCCAGCGGG CCGTCGGGGA GGCGATCGGC
ACCGATCTGG CGACCATCCA TCCGATGAAC CGGTTGCTGC AGGGTGAGGT CGGTTCCGGC
AAGACGGTGG TGGCCCTGCG GGCGATGCTG CAGGTCATCG ACTCCGGCCG GCAGGCCGTC
ATGCTGGCGC CAACCGAGGT GCTGGCCGCC CAGCACGCCC GATCCCTGCG GCAGGTGCTC
GGGCCGTTGG GTCGCGGCGG GGAGCTCGGC GCGCCGGCCG AATCCACCGC GATCACCCTG
CTCACCGGCT CGCTGCCGGC CAAGGCCCGC AAGCTGGCCC TGCTCACCAT CGCCTCCGGG
CAGGCCGGGA TCGTGGTCGG CACCCACGCG TTGCTCTCCG AGGGGGTGTT CTTCGCCAAC
CTCGGGCTGA TCGTGGTCGA CGAGCAGCAC CGGTTCGGCG TCGAACAGCG ACATGCCCTG
CGCACCAAGC ATCCTGACGG TAGCCCGCCG CACGTGCTGG TGATGACGGC CACCCCGATC
CCGCGCACGG TGGCGATGAC GGTGTTCGGC GACCTGGACA CCTCCACCCT GGACGAGTTG
CCCCGCGGCC GGTCGCCGAT CGGCACCACC GTGGTGCCGG CCGCGGAGAA ACCGGCCTGG
GTGGAACGGG CCTGGCAGCG GATCCGCGAG GAGGTCGGCA AGGGGCATCA GGCGTACGTG
GTCTGCCCGA AGATCGGCGA CGGGTCTGGT GAGGATGCCG CCGGAGAACT GTTCGAGGAC
GGCTCGGTGG CCGAGACGGA CAGCGACGCC GAGGGCGAAT CGACCCGGCG GGCGCCGCTG
GCGGTGACCC AGGTGGCGGC CATGCTGCGG GACGGTCCGC TGGCCGACCT GCGGGTCGGC
GTCCTGCACG GCCGGCTGGT GCCGGCCGAG AAGGACGCGG TGATGACCGC TTTCGCCGCC
GGCGAGCTGG ACGTGCTGGT CGCCACCACC GTCATCGAGG TCGGCGTCGA CGTGCCCAAC
GCCACCATGA TGGTGATCAT GGACGCCGAA CGGTTCGGCA TGTCCCAGCT GCACCAGCTG
CGCGGCCGGG TCGGCCGGGG CAGCGCCCCG GGCATCTGCC TGCTGGTCAC CGAATCGCCC
GAGGGCACCC CCGGCCGGTT CCGGCTGGCC GCCGTCGCCG CCACCACCGA CGGCTTCGAG
CTCGCCGAGG CCGACCTCGA ACTGCGCCGC GAGGGCAACG TGCTCGGCAC CGAGCAGGCC
GGCAAATCCA CTGCGCTGCG CCAACTGTCG TTGCTGCGGG ATCGGGACGT CATCGAGGAC
GCGCGGACCG ACGCGGCCGG GCTGGTCGGC GACGACCCGG CCATGGCCCG CTGGCCCGGG
CTGGCCGACA TGGTCTCCGC CGTCATCGCC GAGCAGGATC AGGACTACCT GGACAAGGGC
TGA
 
Protein sequence
MEQIGLDTPL KELIGARTAG RLADKLELAT VGDLLRYYPR KYDQRGRLTD LGKLVVGERA 
TVWARVVKVV EKELGHRGPG RGARGRGGGV KHITKVVIGD DHRQLTCTFF NQYHWTKTLP
PGTDAMFSGK ITKFQTELQM SSPSVAILSD GRGSDGSTEN NPIEIIESFP GGVIPVYPLV
EGVTQAVLQR SVRLLLDLGP RIEDPVPEVL LAQRGLVDLA TALHDIHRPR TQEHLDRAKA
RLRYDEALSV QLVLARRKAL AREFPAEPCP RVPGGLLDAF DANLPFELTA GQRAVGEAIG
TDLATIHPMN RLLQGEVGSG KTVVALRAML QVIDSGRQAV MLAPTEVLAA QHARSLRQVL
GPLGRGGELG APAESTAITL LTGSLPAKAR KLALLTIASG QAGIVVGTHA LLSEGVFFAN
LGLIVVDEQH RFGVEQRHAL RTKHPDGSPP HVLVMTATPI PRTVAMTVFG DLDTSTLDEL
PRGRSPIGTT VVPAAEKPAW VERAWQRIRE EVGKGHQAYV VCPKIGDGSG EDAAGELFED
GSVAETDSDA EGESTRRAPL AVTQVAAMLR DGPLADLRVG VLHGRLVPAE KDAVMTAFAA
GELDVLVATT VIEVGVDVPN ATMMVIMDAE RFGMSQLHQL RGRVGRGSAP GICLLVTESP
EGTPGRFRLA AVAATTDGFE LAEADLELRR EGNVLGTEQA GKSTALRQLS LLRDRDVIED
ARTDAAGLVG DDPAMARWPG LADMVSAVIA EQDQDYLDKG