Gene Namu_1843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1843 
Symbol 
ID8447448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2027282 
End bp2028697 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content68% 
IMG OID645040972 
Productcytochrome bd ubiquinol oxidase subunit I 
Protein accessionYP_003201222 
Protein GI258652066 
COG category[C] Energy production and conversion 
COG ID[COG1271] Cytochrome bd-type quinol oxidase, subunit 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0473426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.121019 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAGT TGGACCTGGC CCGCCTGCAG TTCGCCACCA CCAGCGTGTA CCACTTCTTC 
TTCGTCCCGA TCACGATGGG CATGGCCATC CTGGTCGCCG TGCTGCACAC CCGGTGGTTC
CGCCGGGGCA CCCCCGAGCT CAAGCGAGTG CTGCGCTTCT TCGGCGGGCT GATGCTGATC
TCGATCAGCG TCGGCGTCGT CACCGGCCTG GTCCAGGAGT TCCAGTTCGG GCTCAACTGG
TCGGCCTACT CACGCTTCGT CGGCGACGTC TTCGGCGCCC CCCTGGCCAT GGAGGGACTG
GCCGCCTTCT TCCTCGAGTC CACGTTCCTG GGCCTGTGGT TGTTCGGCTT CAACGTGCTG
CCGCGCCGGG TGCACCTGCT CACGGCCTGG ATGGTGGCGC TGGGCGCGTG CCTGTCGGCC
CTGTTCATCA TCGCCGCGAA CTCGTGGATG CAGAACCCGC GCGGCTACAC CATCAACCCG
GACACCGGCC GGGCCCAGCT GACCTCGATC GGCGACGTGT TCACCAACCC GGTCTTCATC
TGGGGCTACC TGCACGTGCT GCTGGTAGCC CTGATCTTCG GCGGCGGGAT GCTGCTGGCC
GTCTCGGCCT GGCAGCTGCG GCGGCGGGCC ACCACCGACG GCACGGTGGC CGAGTTCACC
GGCACGGCCA AACTCGGGCT GACCGCGCTG CTGATCGGCA CCGTGCTGCA GTTCCACGTC
GGCGGCCAGC TGGGCATCAA CGAGACCTCC TACCAGCCGA TGAAGATCGC CGCGGCCGAG
GCCAACTGGC AGACCTGCCA GCCCTGCTCG TTCTCCATGC TGCAGATCGG CGGCTGGACC
GCCGACGACC CGCCGACCAA GATCATCGAG ATCCCGCACC TGCTGTCCCT GCTGGCCACC
GGCACCTGGA ACGGCGAGGT CCAGGGACTG ACTCCGCTCA ACGAGCAGTA CCAGCAGCAG
TACGGACCGG GCGAGTACGT GCCGAACGTG TTCATCCAGT ACTGGTCGAT GCGCGTGATG
GCCTACCTGG CCACCCTGGT CGCCCTGTTC GGCGTGTGGG GCATCTGGTT GTGGTGGCGC
AAGAAGCTGG CCACCGCCCG GGTCTTTCTG TGGATCGCCA GCTGGATCAT GATCACCCCG
TTCCTGATGT CCACCGCGGG CTGGTTCCTG ACCGAGAGCG GGCGCCAACC CTGGGTCGTG
CAGGGACTGA TGCTGACCAA GGACGGGCTG TCCGGCTCCG GCAGCGCCGG CCAGATCGTG
GTCAGCCTGA GCATCGTGGT CGTGCTGTAC ACCACGATCG GGGTGATCGC CGCGATCCTG
ATGCTCCGGC ACGCCCGGCA GCCGCTGCCG GCCGAACCGC TCACCCCGGA CCGGCCCGCG
GACGCTGCCG AACCGACCCC CTCGCTGACG TACTGA
 
Protein sequence
MDQLDLARLQ FATTSVYHFF FVPITMGMAI LVAVLHTRWF RRGTPELKRV LRFFGGLMLI 
SISVGVVTGL VQEFQFGLNW SAYSRFVGDV FGAPLAMEGL AAFFLESTFL GLWLFGFNVL
PRRVHLLTAW MVALGACLSA LFIIAANSWM QNPRGYTINP DTGRAQLTSI GDVFTNPVFI
WGYLHVLLVA LIFGGGMLLA VSAWQLRRRA TTDGTVAEFT GTAKLGLTAL LIGTVLQFHV
GGQLGINETS YQPMKIAAAE ANWQTCQPCS FSMLQIGGWT ADDPPTKIIE IPHLLSLLAT
GTWNGEVQGL TPLNEQYQQQ YGPGEYVPNV FIQYWSMRVM AYLATLVALF GVWGIWLWWR
KKLATARVFL WIASWIMITP FLMSTAGWFL TESGRQPWVV QGLMLTKDGL SGSGSAGQIV
VSLSIVVVLY TTIGVIAAIL MLRHARQPLP AEPLTPDRPA DAAEPTPSLT Y