Gene Namu_1825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1825 
Symbol 
ID8447430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2005065 
End bp2005667 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content75% 
IMG OID645040954 
ProductHNH endonuclease 
Protein accessionYP_003201204 
Protein GI258652048 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00061732 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.125783 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCAG CCGGTCACGC CGGCCGTGGT CCCGCGCCCG TGCGCCCGCT GCCCGGACCG 
AGCCTGCACC GTGAACCCGA GCCGGGTCGG CCGGTCGCGG TGCTGCGGGT GCTGCTGCTC
AACGCCAGCC ACGAACCGCT GGCCGTGGTG ACCGGCCGGC GCGCCCTGGT GCTGGTGGTG
GCCGGCAAGG CCGAGTGCGT GGTGGAACGG CCCAGCGGTC TGGTCCGCTC GCCCTCGGTG
GCGTTGGCCG TGCCGGCGGT GGTCCGCCTT CGACGATACG TGCGGGTGCC CTACCCGGCG
CCGCCGGCGG TGACCCGGGC CGGGGTGCTC AAGCGTGACG GCCGACGCTG CGCCTACTGC
CAGGCCCGCG CGGACACGGT CGATCATGTG CTGCCGCGTA GCCGGGGCGG CGGCCACACC
TGGGAGAACT GCGTGGCCTG CTGTGCCCGC TGCAACGCGC GCAAGGCCGA CCGGCTGCTG
GAGGAACTGG GCTGGGCGTT GTCGATCACC CCCGGTCCGC CGCGCCGGGG TGTCCTGGGC
CGGATGTGGG GCAACGAGGA GTCGGACCCG GCCTGGGAGC CCTGGCTGCC GTCGGCCGCC
TGA
 
Protein sequence
MKPAGHAGRG PAPVRPLPGP SLHREPEPGR PVAVLRVLLL NASHEPLAVV TGRRALVLVV 
AGKAECVVER PSGLVRSPSV ALAVPAVVRL RRYVRVPYPA PPAVTRAGVL KRDGRRCAYC
QARADTVDHV LPRSRGGGHT WENCVACCAR CNARKADRLL EELGWALSIT PGPPRRGVLG
RMWGNEESDP AWEPWLPSAA