Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1784 |
Symbol | |
ID | 8447388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 1960172 |
End bp | 1960945 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 645040912 |
Product | hypothetical protein |
Protein accession | YP_003201163 |
Protein GI | 258652007 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.000285856 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0589875 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGACTCGC TCCTGTGGAT CGTGATCATC GCGGCGATCG TCGTCGCCGG TGTGTGGTAC ATGCGCCAGC GGACAGTGAC CGCCACCCGG TCGCTGGAGG ACGCCCAGGC CGAGGCCCGC CGCTGGGTCG AGCGGCTCGG CGGGCAGGTC TACGCGCTGG ACCCCCGCGA CGATCCCGCC GCCAAGCAGG CCCTGGCCGA CGCCTCCGAG CGCTACACGG CCGCGGGCTC CCAGGTCGAG CAGGCCAAGT CGGTGCAGCA GTACCGGCTC GCCCAGCAGA CCGCCTACGA AGGCCTCTAC TACGTCCGGG CTGCGCGCAC CTCGCTGGGC CTGGACCCCG GCCCCGAGCT GCCGGCGATC CCCGGCCAGG AGCGGGCCGG CGCGGTCACC GAGGCGCGCG CGGTCACCGT CGAGGGCCAT GAGTACGAGG CGTCGCCGAC GCCGGGTCGG GGCACCCAGC ACTACTACCC GGGTGGCATG GTCGCCGGCC GGCCGGTGCC CCGCGGCTGG TACTCCGAAC CCTGGTGGAA GCCGGCCCTG GTCGCCGGCG CCTGGGGGGT GGGCACCTAC CTCGTGGCCT CGACCCTGTT CGCCGGCATG GCCGGGGCGA ACTTCGACGC CGGGTACGAC GCCGGGTACG CCGACGCCGC CGGAGACGGT GGGGACATGG GCGGGGACAA CGGTGGCGAC ATGGGCGGGG ACGCCGGTGG CTACGACTCG GGTGGCTACG ACTCGGGTGG TTTTGACGGC GGGGGCTTCG ACGGCGGGTT CTGA
|
Protein sequence | MDSLLWIVII AAIVVAGVWY MRQRTVTATR SLEDAQAEAR RWVERLGGQV YALDPRDDPA AKQALADASE RYTAAGSQVE QAKSVQQYRL AQQTAYEGLY YVRAARTSLG LDPGPELPAI PGQERAGAVT EARAVTVEGH EYEASPTPGR GTQHYYPGGM VAGRPVPRGW YSEPWWKPAL VAGAWGVGTY LVASTLFAGM AGANFDAGYD AGYADAAGDG GDMGGDNGGD MGGDAGGYDS GGYDSGGFDG GGFDGGF
|
| |