Gene Namu_1780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1780 
Symbol 
ID8447383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1955697 
End bp1956143 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content71% 
IMG OID645040907 
Productprotein of unknown function DUF779 
Protein accessionYP_003201159 
Protein GI258652003 
COG category[S] Function unknown 
COG ID[COG3564] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.00396827 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.10554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAGC GCATGTCGGC GGACTCGGGT CAACCGGCGG CCGGTGCCAC GGCGCCGGAG 
CCGGTGGCCC GGGTCGCGCT GACGCCCAAG GCGGTGGCCC TGCTGTCCGA GCTCACCCAG
CTGCACGGAC CGCTGATGTT CCACCAGTCC GGCGGGTGCT GCGACGGGTC GGCGCCGATG
TGCTACCCGC TGGGCGAGTT CCGGGTCGGT GGCGCCGACG TCCGTCTGGC CGAGCTGGAT
GCCGGCCTGG CGCAGGCCAT CCCGTTCTGG ATGTCGCAGT CCCAGTTCGA GTACTGGAGC
CACACCCACC TGACCGTGGA CGTGGTGCCC GGTCGGGGGA GTGGCTTCAG CGTGGAATCG
CCGACGGGAC AACGATTCCT GATTCGATCC CGGTTGTTCA CCGACGAGGA GTCCGCGCGG
CTCCCGGCGG TGGTCAGCGG CGGCTAG
 
Protein sequence
MPQRMSADSG QPAAGATAPE PVARVALTPK AVALLSELTQ LHGPLMFHQS GGCCDGSAPM 
CYPLGEFRVG GADVRLAELD AGLAQAIPFW MSQSQFEYWS HTHLTVDVVP GRGSGFSVES
PTGQRFLIRS RLFTDEESAR LPAVVSGG