Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1656 |
Symbol | |
ID | 8447255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 1822090 |
End bp | 1822911 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 645040779 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003201035 |
Protein GI | 258651879 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0328818 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGATG AGGCGCTGGT CGCGCTGGCC GCCCCGCCCG AGGCGGCCGG CGCGGTCCGG ACGATGATCG GCTACCGGAT GGCCGCCGAG CCCGGTGAGC ATCGCGGCCT GCCCAGCCCC TACCTGACCC TGGTGTTCTC GCTGTCCGGG CCGCTGCCGA TCCACGTCCC GTCCCCCGCG GGCCGGCGGG AGGGCGCGTT CCGGATCCCG TTGGGCGGCC TGCACACCCG GGCCGTGCTG TTGCCCCGCC GGCTCCCGCA CGCCCCGACC TCCGCTCAAC GCGGCATCCA GTTGGCCGTG CATCCGCTCG CCGCCCGGGC CGTCTTCGGG GTGCCGGCCG CGGCGCTCAC CGACGAGGTG CTCGAGGTCG GGGACGTCGT CGGCCCGCTG GCCGGGCTGA CGGAGCGGCT GGCCGCGGAT CCGACCGGGC CGGACGCGGT GGCCGCGGTC AACGGGTGGC TGCGCGAGCG CACCCGGGCC GCCGCGGCCT CACCCGCCCC GCGGGAGCTG GCCCGCGCCT GGCGGCTCAT CGTGGGCAGC GACGGCCGGG CCCGGATCGG CGACGTCGCC CGCGACGTCG GTTGGTCGCG GGCCCACCTG ACCCGGCGGC TGCGCGCGGA GATCGGCGTC GGCGCCAAGG ATCTCGCCCG GCTGGCCCGG TTCCAGCGAT CCCGCCGGCT GATGATCGGT CGGGCCGGGG AGCTCGGCCG GATCGCGCAG GACAGTGGCT ACGCCGACCA GTCCCACCTG ACCGCGGAGT GGCGGGAGTT CGCCGGCTGC ACCCCGCGGC AATGGATGGC CGCCGAGCTG GCCGACCACT GA
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Protein sequence | MADEALVALA APPEAAGAVR TMIGYRMAAE PGEHRGLPSP YLTLVFSLSG PLPIHVPSPA GRREGAFRIP LGGLHTRAVL LPRRLPHAPT SAQRGIQLAV HPLAARAVFG VPAAALTDEV LEVGDVVGPL AGLTERLAAD PTGPDAVAAV NGWLRERTRA AAASPAPREL ARAWRLIVGS DGRARIGDVA RDVGWSRAHL TRRLRAEIGV GAKDLARLAR FQRSRRLMIG RAGELGRIAQ DSGYADQSHL TAEWREFAGC TPRQWMAAEL ADH
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