| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1602 |
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| Symbol | |
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| ID | 8447201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 1766259 |
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| End bp | 1768082 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 645040729 |
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| Product | Integrase catalytic region |
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| Protein accession | YP_003200985 |
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| Protein GI | 258651829 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.090134 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.142555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCTGG TTGTCTTGTC GAAGGTGGAG CAGCGGCTGG ACGCAGTTCG GGCGGTGCTG
GCGGGTGCCA CGGTGACCGA GGTCGCGGCC GCGGTCGGGG TGTCCCGGGT GAGCGTGCAT
GCCTGGTTGC GGCGGTACCT GACCGAGGGC GTGACCGGGC TGGCGGACCG GTCGCACCGA
CCCCGGTCGT GCCCGCACCA GGCCGGCGAC GAGGTGTCGG TGCGGGTCGC CGAGCTGCGG
CGGACCCACC CACGGTGGGG CGCCAAGCGC ATCCGGATGG AGCTGCTGCG CAAGCCCGCC
GGCCTGACGG TTCCGTCGAC GGCCACGATC AACCGGATCC TGATCCGGCA CGGCCTGGTC
ACCCCACGCC GCCGGAAACG GCCGCGGAGC TCGTACCAGC GGTGGGAACG ACCGGGGCCG
ATGCAGCTGT GGCAGCTCGA CATCGTCGGC GACGTCTGGC TGGTCAACCC TGCCACCGGA
GTTTTGCGGG GGGTCAAGGT CGTGACCGGG GTGGACGACC ATTCCCGGTT CTGCGTGATC
GCCGCGGTCG TCGAGCGGGC CACCGGGCGG GCGGTGTGCC TGGCCCTGGC CGCGGCGTTG
GCCCGGTTCG GTGTTCCGGG CGAGATCCTG ACCGACAACG GTAAACAGTT CACCGCCCGG
TTCGGTCGCG GCGGGGAGGT GTTGTTCGAC AAGATCTGCC GGCACAACGG GATCACCCAC
CGGCTGACCC AGCCGGCGTC GCCGACCACG ACCGGCAAAA TCGAACGATT CCACCTGACG
CTGCGCCGGG AGCTGCTCGA CGATCACGAG CCGTTCGAAT CGCTGGCCGC CGCGCAGGCC
GCGGTCGACG AGTTCGTCCG GGTCTACAAC ACCGAACGGC CGCACCAGGC CTTGGACGGG
CAGCGGCCGG TCAGCCCGGC CGACCGGTTC ACCCCCATCA ACCCCGCCGA GGCGGAGTTG
GTGCCGCTGT GGCTGCCACC CACGGTCGCC CCCGCGCCGG CTCCGACGAC GTCCGCACCG
TCCGGTGACC AACCCGACAG TGCCGGCGCG GCAACACCTC CAGGCCCCGG CCGGGGCGGC
GCGGGCGGGG CGGTCGAGTT CGACCGGGTT GTTCCGCCGG CCGGGAACTT GCAACTGGCC
GGCCGGCAGC TCTGGCTCGG CCCGGCCCGC TCCGGGCAGG TCGTGCGGTT CTGGGCCGAC
ACCACCCTGA TCCATTTGTT CATCGGGGGA ACCCGGGTCA AGACGGTCCG CTCGCACCTG
ACGGTCACCG ACCTGTCCGC GCTGCTCGCC GCCGGGGCCG TGGCCGCCGG CCCGTCCCCG
CTGCCGCCGG TCCAACCCGG TGACGCCGTG GAGGTCGAAC GGGTCGTGAC CCGCGGCGGC
ACCGTCGTCC TGGGCGGGCA CGCCATGCTG GCCGCGGAGA TCCTGGCCGG CCGGCAGGTC
GGGATCCGCA TCGAACGCGA CACCCTGATG TTCTTCGACC TGGACACCCG TGAGTTGCTG
CGGGTGCGGC CGAACCCGTT GCCGCACGAG CAAATCGTTC GTCTCCGCGG GAACCGGCCG
GCCGGGCCGC CACCCCGGCC GTCTACCGAA CCGGTCCGGG TCCAGCGTCG CGCGTCGAGC
ACCGGCGTGA TCACCGTGTG CCGACAGAAA GTCGCGCTCG GCCGCACCCA TCAGCACCAG
ACCGTGACCG TTCACGTGTC CGACACCACC CTGGCCATCG AATTCGACGA CGGCGAAACC
CGAATCATTC GACGGACCAC GACAATTCCG GTGCGTAACA TCAAGGCCGA CCGACCACGA
TCGGCCACAA CCCAAGTTGT CTAG
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| Protein sequence | MALVVLSKVE QRLDAVRAVL AGATVTEVAA AVGVSRVSVH AWLRRYLTEG VTGLADRSHR
PRSCPHQAGD EVSVRVAELR RTHPRWGAKR IRMELLRKPA GLTVPSTATI NRILIRHGLV
TPRRRKRPRS SYQRWERPGP MQLWQLDIVG DVWLVNPATG VLRGVKVVTG VDDHSRFCVI
AAVVERATGR AVCLALAAAL ARFGVPGEIL TDNGKQFTAR FGRGGEVLFD KICRHNGITH
RLTQPASPTT TGKIERFHLT LRRELLDDHE PFESLAAAQA AVDEFVRVYN TERPHQALDG
QRPVSPADRF TPINPAEAEL VPLWLPPTVA PAPAPTTSAP SGDQPDSAGA ATPPGPGRGG
AGGAVEFDRV VPPAGNLQLA GRQLWLGPAR SGQVVRFWAD TTLIHLFIGG TRVKTVRSHL
TVTDLSALLA AGAVAAGPSP LPPVQPGDAV EVERVVTRGG TVVLGGHAML AAEILAGRQV
GIRIERDTLM FFDLDTRELL RVRPNPLPHE QIVRLRGNRP AGPPPRPSTE PVRVQRRASS
TGVITVCRQK VALGRTHQHQ TVTVHVSDTT LAIEFDDGET RIIRRTTTIP VRNIKADRPR
SATTQVV
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