Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1577 |
Symbol | |
ID | 8447175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 1738177 |
End bp | 1738737 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 645040704 |
Product | protein of unknown function UPF0054 |
Protein accession | YP_003200961 |
Protein GI | 258651805 |
COG category | [R] General function prediction only |
COG ID | [COG0319] Predicted metal-dependent hydrolase |
TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.15724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0504485 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCATCG AGGTGGCCAA CGAGTCCGGG GTCCCGGTCG ACGAGATCGT CCTGGTGTCG GTGGCCCGGT ACGTGCTGGA CCGGATGCGG ATCAACCCGC TGGCCGAGCT GTCCATCCTG CTGGTCGACG TCGAGGCGAT GACCGAGCTG CACGTCAAGT GGATGGACGA GCCCGGCCCG ACGGACGTCA TGAGCTTCCC GATGGACGAG CTGGACACCG CCCGCCGGCC CGACGAGTCC GGTCCCGGCC CGGCGCTGCT GGGTGATGTG GTGCTGTGCC CGGCGGTCGC CGCCGAGCAG GCCACCGCGG CCGGTCACTC GGTGCAGGAC GAGCTGCACC TGCTGACCGT GCACGGCGTG CTGCACCTGC TCGGCTACGA CCACGCCGAG CCCGCGCAGG AGCGGGAGAT GTTCCGGCTG CAGAACGAAC TGCTGGACAC CTGGCGCGAG CAGCAGGCCG CCGCGGCCCG CAAGGCCCGC CTGGCCGCCG CGGACGCCGC GGTGCTCGAC GTCGTCGGGC TCGCCGGTCC CACCGACCCG GAAACGAGCG GGCGGGGCTG A
|
Protein sequence | MTIEVANESG VPVDEIVLVS VARYVLDRMR INPLAELSIL LVDVEAMTEL HVKWMDEPGP TDVMSFPMDE LDTARRPDES GPGPALLGDV VLCPAVAAEQ ATAAGHSVQD ELHLLTVHGV LHLLGYDHAE PAQEREMFRL QNELLDTWRE QQAAAARKAR LAAADAAVLD VVGLAGPTDP ETSGRG
|
| |