| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1569 |
|---|
| Symbol | |
|---|
| ID | 8447167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 1730804 |
|---|
| End bp | 1732039 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 645040696 |
|---|
| Product | oxygen-independent coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_003200953 |
|---|
| Protein GI | 258651797 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.0883271 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0181268 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTGAACA CTGGTCGGGT GCCCTCCACG CTGCCCGACG GCGACCCGGT GCCGCCGGAC
GGGTCGCTGC CCGATCAGGC CCGCCAGGGC GCAGCCGACC GCACCCTGTC CTTCTACGTG
CACGTGCCGT TCTGTGCGAC CCGCTGCGGC TACTGCGACT TCAACACCTA CACGGCCGGC
GAGCTGGGCA GCGCGGCGTC CCCGCAGTCG TGGCTGGACG CGGCGCTGGC CGAGGTCGAG
CTGGCCGCTC GGGTGCTGGG CCGGGGTCGC ACCGTCTCGA CCGTCTTCGT GGGCGGCGGC
ACCCCGTCGC TGGTCGGCGC CGAGCCGCTG ACCCGGATCC TGACCGCCAT CGACGAGCGG
TTCGGCCTGG CCGACGACGC CGAGGTGAGC ACCGAGGCCA ACCCCGAGTC CACCGACCCG
GCCCTGCTCG GCGCCCTGCG CGCGGCCGGC TTCACCCGGC TGAGCCTGGG CCTGCAGTCC
ACCTCCCGGC GGGTGCTCAC CGTCCTGGAT CGCACGCACA CCCCCGGCCG GGCCCTGGAC
GTCGTGCGCT GGGCCGGGCA GGAGGGCTTC GAGCACGTCA ACCTCGACCT GATCTACGGC
ACGCCCGGTG AGACCGACGC GGAGTTCACC GACTCGTTGG CCGCCGTGAT CGCCAGCGGG
GTCGATCATG TCTCGGCCTA CTCGCTGATC GTCGAACCGG GCACCCGGCT GGCCCGGCAG
TTCGACCGCG GGGTGCTGCC GATGCCCGAC GAGGACGTGC TGGCCGACCG GTACCTGCTG
GCCGACGAGC TGCTCACCGG CGCCGGCCTG CACTGGTACG AGGTGTCCAA CTGGGCCCGG
ACGCCGGCCG GCGGGTGCCG GCACAACCTG GCCTACTGGA CCGGGCAGGA CTGGTGGGGG
ATCGGCCCGG GCGCGCACTC GCACGTCGGC GGGGTGCGCT GGTGGAACGT CAAGCACCCG
GCCGCCTACG CGCAGCGGCT GGCCGAGGGC CGCAGCCCCG GGCAGGCCCG GGAGGTGCTG
GGGCCGGACG ACCGGCGGCT GGAGGACGTG CTGCTGCGGC TGCGGCTGCG GGACGGGCTG
GCCCTGTCCG GGCTGTCCGA GCAGGGCCGC CGGCACGCGC GGATCGCGGC GGCCGACGGG
TCGCTGGACG GCGCCGCGCT GGACCGGGGT CGGGCCGTGC TGACCCTGCG CGGGCGGCTG
CTGGCCGACG GGATCGCGCT CAGCCTGGCT GAGTGA
|
|---|
| Protein sequence | MVNTGRVPST LPDGDPVPPD GSLPDQARQG AADRTLSFYV HVPFCATRCG YCDFNTYTAG
ELGSAASPQS WLDAALAEVE LAARVLGRGR TVSTVFVGGG TPSLVGAEPL TRILTAIDER
FGLADDAEVS TEANPESTDP ALLGALRAAG FTRLSLGLQS TSRRVLTVLD RTHTPGRALD
VVRWAGQEGF EHVNLDLIYG TPGETDAEFT DSLAAVIASG VDHVSAYSLI VEPGTRLARQ
FDRGVLPMPD EDVLADRYLL ADELLTGAGL HWYEVSNWAR TPAGGCRHNL AYWTGQDWWG
IGPGAHSHVG GVRWWNVKHP AAYAQRLAEG RSPGQAREVL GPDDRRLEDV LLRLRLRDGL
ALSGLSEQGR RHARIAAADG SLDGAALDRG RAVLTLRGRL LADGIALSLA E
|
|---|
| |