| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1536 |
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| Symbol | |
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| ID | 8447134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 1695510 |
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| End bp | 1696388 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 645040664 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003200921 |
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| Protein GI | 258651765 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.00467401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGGC CGATCAACCA GTTGGGCCTG CATTCGCTGG TCTACACCGC GCAGTGGGAC
GAGGCGGCCG CCCGGGACGT GTTCACCCGG GCCGCCGGCC TGGGCTATGA CCTGGTCGAG
GTGCTGATGT TCGACCCGGC CGCGACCGAC ACGGCCATGA CCGCCCGGCT GGCCAAGGAA
TACGGCGTCG GCGTGATCAC CGCGGTGTGC GGCACCCTGA CCGCGGACAT CTCCAGCGCC
GATCCGCAGG TCGCTCGGCG CGGCGAGGAA TTCGTCGAGC GGGCGATCGT CGCGGCGGCC
GAGATGGGTT CACCCGCCCT GGGCGGCCCG AGCTTTTCCG CCGTGCACCG CTACACCACG
GCGCCCTCGC CCGTGGCTCG GGAACGAGCA ATCGAGATCT ACGGCCGCAT CGCCGAGCGG
GCCTCCGCCG CCGGGATCCG GGTCGGTCTG GAGGCGCTGA ACCGGTACGA GAGCAACTTC
ATCAACACCG TCGGGCAGGC CGCCGAGCTG GTGCGGGCGG TCGGCTCCGA CGCGCTGTTC
GTGCACGGCG ACCTGTTCCA CATGAACATC GAGGAGGCCG GGCTGGGGGC GGCGTTCGAA
TCGGTGGCCG ACGTGCTGGG CTACATCCAC GTCGCCGAGA GCCACCGCGG ACCGCTCGGT
GATGGGACCA TCGACTGGGA CGACGTGTTC GCCGCGCTGG CCCGCATCGG CTACACCGGC
CCGATCACCT TCGAGTCGTT CTCGCCGAGC GTGCTGGGCC CGGAGTGGGC CAGTCTGGTC
GCGCTGTGGC GCGACCCGTG GACCGATCCG GACAAGGTCG CCGGCGACGC GCTGGCGTTC
CTGCGGAACA AGCTCACCAC CCACCAGAAG GGCCTGTAG
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| Protein sequence | MNRPINQLGL HSLVYTAQWD EAAARDVFTR AAGLGYDLVE VLMFDPAATD TAMTARLAKE
YGVGVITAVC GTLTADISSA DPQVARRGEE FVERAIVAAA EMGSPALGGP SFSAVHRYTT
APSPVARERA IEIYGRIAER ASAAGIRVGL EALNRYESNF INTVGQAAEL VRAVGSDALF
VHGDLFHMNI EEAGLGAAFE SVADVLGYIH VAESHRGPLG DGTIDWDDVF AALARIGYTG
PITFESFSPS VLGPEWASLV ALWRDPWTDP DKVAGDALAF LRNKLTTHQK GL
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